Gene Bind_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1276 
Symbol 
ID6199975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1483617 
End bp1484354 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID641705269 
Productshort chain dehydrogenase 
Protein accessionYP_001832406 
Protein GI182678260 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.127244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TCATGGGAAA ACGGGCGTTG ATAACAGGCG GAACCAGCGG AATCGGCCTC 
GAGACGGCGC GGCGCTTCAT CGCCGAAGGC GCCCAAATCG CGATCACCGG CACGGATGCA
ACGCGGCTGG AAGAAACCCG CAAGGCCCTC GGCGCCGATG TCCTAACCAT AAGGGCCGAT
TCAGGCGACA TTGCCGATCA ACGAGAGGTC GCGCACAGGG TGGGCGAGGC ATTCGGAACG
CTTGACGTTT TGTTCATCAA TGCGGGCATT GGCGATTTCC GCCCTTTGGA ACAGTTCGAC
GAAGCGGGAT TCGATCGTTC AATGGCGGTC AATTTGAAAG GCCCATATTT TCTCGTACAG
GCCCTTCTGC CGATCCTTGC GAATCCCGCT TCGATTATCC TCAATACTTC GATCAATGCT
CGGATCGGTA TGCCCTATTC CAGCGTCTAT GCGGCCAGCA AGGCTGGCCT TATCTCGCTC
GCACGGACAT TCTCAGGCGA ATTGATCAAG CGCGGCATCC GTGTCAATGC GGTCAGCCCT
GGGCCGATCG CCACTCCCCT CCACGGCAAG ATCGGCATGA ACGAGGCCGA TATTGAAGGT
CTGGTCTCGC AGATCCCTCT CGGGCGGCGC GGGGAACCGG CTGAGATAGC CGAGGCCGTC
GTCTTCCTCG CCTCAGATGC TGGCGCCTTT GCCGTGGGCA GTGAATGGAT CATCGACGGC
GGGATGAGCA CTCTCTGA
 
Protein sequence
MKRLMGKRAL ITGGTSGIGL ETARRFIAEG AQIAITGTDA TRLEETRKAL GADVLTIRAD 
SGDIADQREV AHRVGEAFGT LDVLFINAGI GDFRPLEQFD EAGFDRSMAV NLKGPYFLVQ
ALLPILANPA SIILNTSINA RIGMPYSSVY AASKAGLISL ARTFSGELIK RGIRVNAVSP
GPIATPLHGK IGMNEADIEG LVSQIPLGRR GEPAEIAEAV VFLASDAGAF AVGSEWIIDG
GMSTL