| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1271 |
|---|
| Symbol | |
|---|
| ID | 6201810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1478659 |
|---|
| End bp | 1479777 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641705264 |
|---|
| Product | catalase domain-containing protein |
|---|
| Protein accession | YP_001832401 |
|---|
| Protein GI | 182678255 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0226088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGT TTCCTGGTCC ATCAAAAAGC GCGCCTGCGC CTTTGTCGTC CACGGCCCTT
GTCCTGCGCT TTGGTGTAAT CGGCGCCATT GTCTGCGCCG GCGCGGCCGC CTTTGCTTAT
GCGGGCGGCT GGTTCTCCCC CGCGCGGCTG ACGCCCAGCC GGTTAATCGA AACATTCCAG
GAGGTCAACG GCTTCTATCC GGGATTTCGG CGCAATCACG CGAAGGGCAT CTGCTTTTCA
GGCCATTTCG AGAGCAATGG CCAGGGCGCT GACCTCTCGA AAGCCAGCTT GTTCGCTCCA
GGCCGCGTCA CCCCAGTCAC CGGCCGTTTC GCCTTGGCGG GTGGCCAGCC CTACGCAGCC
GATGCCGAGA CGACAGTGCG CAGCATGGCG GTCCGCTTCC GGCTCGACAA TGGCGAAGAA
TGGCGAACCG GCATGAATGA TATTCCTGTC TTCGCAGTAA ACACGCCTGA GGCCTTTCGA
GATCAGCTCC TGGCGGGGCG AAAGGATCCT GCGACCGGCA AGCCGGATCC CGCCGCAATG
GCGGCTTTTC TCGCAGCGCA TCCTGAGACA GCGCGGGCCG CGGCCCTGAT CAAGGCCCGC
AGCATTTCCT CGGGCTTCGA CGATGATACT TACAACGGCC TCAATACGTT CCTGTTTGTC
AATTCGGCCG GTGTCGCGAC GCCCGTGCGT TGGTCGATGG TGCCCATCGC CCCCTTCATT
AGCGAGGAAC CGGAAAAAAC CGTGAAGATC GACAAGGATT TCCTGTTCGT TGATCTGATC
AATGAAGCTG GGGACCATCC TCTGCAATGG CGTCTCGTCG TTATGGTCGG AAAGCCGGGT
GATCCCACGA TGGACGCGAC GCTTCCCTGG CCGAGCGAGC GTGAGCACCG GGAACTTGGC
AGTCTTACAA TAGAAAGCCT TCAGGATGAA GCCGATGGGC GCTGCCGCGA CGTCAATTTC
GACCCGCTCA TCCTGCCGCA GGGCATTGAG GCCTCGGACG ATCCGCTGCT GAGCGCGCGA
TCGGCCGTTT ATTCACAATC CTTTACCCGC CGCGAGGGCG AGCCCAAAAC ACCGAGCGCC
GTGATGATGC CGAATGGGAC GAAAGGGGAC AAATCATGA
|
|---|
| Protein sequence | MSQFPGPSKS APAPLSSTAL VLRFGVIGAI VCAGAAAFAY AGGWFSPARL TPSRLIETFQ
EVNGFYPGFR RNHAKGICFS GHFESNGQGA DLSKASLFAP GRVTPVTGRF ALAGGQPYAA
DAETTVRSMA VRFRLDNGEE WRTGMNDIPV FAVNTPEAFR DQLLAGRKDP ATGKPDPAAM
AAFLAAHPET ARAAALIKAR SISSGFDDDT YNGLNTFLFV NSAGVATPVR WSMVPIAPFI
SEEPEKTVKI DKDFLFVDLI NEAGDHPLQW RLVVMVGKPG DPTMDATLPW PSEREHRELG
SLTIESLQDE ADGRCRDVNF DPLILPQGIE ASDDPLLSAR SAVYSQSFTR REGEPKTPSA
VMMPNGTKGD KS
|
|---|
| |