| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1232 |
|---|
| Symbol | |
|---|
| ID | 6200904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1432419 |
|---|
| End bp | 1434308 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641705226 |
|---|
| Product | SufS subfamily cysteine desulfurase |
|---|
| Protein accession | YP_001832363 |
|---|
| Protein GI | 182678217 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.153291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA TTATCCCTGA TAACAATCAG GTGGCGCCTC TCGATCCGAA CCTTCTGGCT
CGGATCGCCG GGGAGCTGTT TCATCAAGGA ACAGTATCCC CCAATGCGCC CCTCGATATT
CCCACCGTCT CCCCGCCCGC TTCTCCGGTT CCGACGCCTC CCTTGCCGGT CTCTTCCTTG
CCGCCCGGCG GCACAGGTGT TCCCCCGGGA GGAGTAGCGC TCGGCGGTTA CGGCGCGCCG
CCGCCATCCC CACCCAATCT CGGCCTCGCC GTGGCCTCCG CGCCGGTCGC CGCCCCTGAA
CAGCCGGTAT CCTCGCTTTC CTTCACCTCG TTGCCTCCTG GCGGCACGGG TCTTCCTCCC
GGGGGCTCGC CCCTAGGCGG TTTCGGCGCC GTCCCTTCGT CCCTCCCAGG CTATGGCACG
CTGGGTGTGG ATACGCTTGG TCTGGCTCCT ATTCCGCCCT TGGCGGAGAC ATTCCCGAGC
GATGCCGAAC TGAAAAACCT CCTCGGCACC TCGAGCCAGC CCCAGCCGAG CCTTGACGGG
ATTCCTCCCG CCATTGGTTC CAAGGGCGTG GAGCCCAATT ATTATTTTCT CGACGGCAAT
TCGGGTTTTC CCCAATCAGC GAAGCCGCAG ACAGATCCGC ATGTGCCCAC GCCGAACCAT
TCCGGTTTCG ACGCCAAGGC CGCTCGGGCA GATTTTCCGA TCCTGCATCA AGTGGTCAAC
GGCCATCCGC TGATCTGGCT CGACAATGCG GCGACCACGC AGAAACCGAA TGCGGTCATC
GACCGCCTTT CGGCCTTCTA CCGGCATGAG AATTCCAACA TCCACCGCGC CGCGCATGAA
CTCGCGGCGC GCGCGACAGA TGCCTATGAA GGTGCGCGGG AAAAGACCCG ACGTTTCCTG
AAGGCAGCCT CCGTGGACGA AATCATCTTC GTGCGCGGTT CGACCGAGGG TATCAATCTC
GTCGCACAAA GCTGGGGGCG CGGAAACATT CGCGCGGGCG ATGAAATCAT CATCACCTGG
CTCGAACATC ACGCCAATAT TGTCCCCTGG CAGATGCTCT GCGCCGAGAA AGGCGCCAAG
CTGAAAGTGG TTCCCGTCGA TAATGATGGT CAGGTCATTC TCGAAGAATA TGAGAAACTG
CTTAGCGATC GCACCAAGCT CGTCTCCTTC ACGCAAGTGT CGAACGCGCT CGGCACTGTG
ACACCGGCTC AGCAAATGGT TGCCATGGCA AGGCGTTATG GCGCGCATGT GCTGGTCGAT
GGGGCGCAGG CGGTCTCGCA TATGCCGGTC GATGTTCAGG CGCTTGATTG CGATTGGTAT
GTGCTATCCG GCCACAAAGT ATTCGGCCCA ACCGGCATCG GTGTCGTTTA TGGCAAACAA
TCGGTGCTCG AAAACAGCCC GGCCTGGCAA GGCGGCGGCA ATATGATCAA GGACGTCACT
TTCGAGAAGA CCGAGTATCA GCCTTCGCCG GCGCGTTTCG AGGCCGGCAC GGGCAATATT
GCCGATGCGG TCGGTCTTGG CGCGGCCTTC GATTATCTCG AACGGTTGGG CATGGAGAAT
GTCGCGCGGC ACGAGCATGA TTTGCTCACC TATGCCACCT TGCGCCTGTC CGAGATCCAA
GGTTTGCGGA TCATCGGCAC GGCGAAGGAA AAGGCCGGCG TTGTGTCCTT CGTGCTCGAT
GGCATCAAGG TCGAGCAGGT GGGACAGGCG TTGAACCGCA AGGGCATAGC CGTGCGCGCC
GGACATCATT GTGCCCAGCC GATCCTGCGC CGCTTCGGCC TGGAGGCGAC CGTCAGGCCT
TCGCTCGCGC TCTACAATAC ATTCTCGGAC ATCGATGCGC TCACCCAGGC GGTTCGCGAG
ATCCGAGCAG AGACTTTGCC GACGCTGTAA
|
|---|
| Protein sequence | MPTIIPDNNQ VAPLDPNLLA RIAGELFHQG TVSPNAPLDI PTVSPPASPV PTPPLPVSSL
PPGGTGVPPG GVALGGYGAP PPSPPNLGLA VASAPVAAPE QPVSSLSFTS LPPGGTGLPP
GGSPLGGFGA VPSSLPGYGT LGVDTLGLAP IPPLAETFPS DAELKNLLGT SSQPQPSLDG
IPPAIGSKGV EPNYYFLDGN SGFPQSAKPQ TDPHVPTPNH SGFDAKAARA DFPILHQVVN
GHPLIWLDNA ATTQKPNAVI DRLSAFYRHE NSNIHRAAHE LAARATDAYE GAREKTRRFL
KAASVDEIIF VRGSTEGINL VAQSWGRGNI RAGDEIIITW LEHHANIVPW QMLCAEKGAK
LKVVPVDNDG QVILEEYEKL LSDRTKLVSF TQVSNALGTV TPAQQMVAMA RRYGAHVLVD
GAQAVSHMPV DVQALDCDWY VLSGHKVFGP TGIGVVYGKQ SVLENSPAWQ GGGNMIKDVT
FEKTEYQPSP ARFEAGTGNI ADAVGLGAAF DYLERLGMEN VARHEHDLLT YATLRLSEIQ
GLRIIGTAKE KAGVVSFVLD GIKVEQVGQA LNRKGIAVRA GHHCAQPILR RFGLEATVRP
SLALYNTFSD IDALTQAVRE IRAETLPTL
|
|---|
| |