| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1169 |
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| Symbol | |
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| ID | 6200210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1354839 |
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| End bp | 1356008 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641705162 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001832300 |
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| Protein GI | 182678154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.567946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCAC AGCCCTCCAC GCGGCCCCGC CGCTCTTATC TTCTTCCCAG CTTTGTTGCG
CTCATTGTCG CGGCCGGCGG CTATTCCCTC TGGCACATGC GGGCCTCCGA GAGCTCACAA
ATCGCCGCGA AAGGGGACTC CCTCACCCCG GCCGTGCCGG TCCAGACCAC TCTTGCCGAA
CAGCGCGATG TGCCGGTCTA TTTGACCGGC ATCGGCCATG TGCAAGCCTT CAACACCGTG
ACGATCAAGA CGCGGGTTGA TGGTCAATTG CAAAAGGTCG CCTTCACGGA GGGACAGGAT
GTCAAGGCGG GTGATCTCCT GGCGCAAATC GATCCCCGCC CCTATCGGGC GGCACTCGAT
CAAGCCATGG CCAAAAAGGT TCAGGACGAA GCGCTGCTCG CCAATGCTCG CCTCGATTTG
CAGCGCTATA TCAATCTCAC CAAAAACGAC ATGGGTGCGA GCCGTCAGCA ACTCGACACC
CAGAAAGCAC AGGTCGCCCA GTTAGAGGCA CAGATCCGGG GCGACCAGGC GCTGATCGAA
AATGCCCAAA CACAGCTCGG CTATACATCG ATTACCTCAC CAATCGATGG CGAGATCGGC
ATAAGGCTCG TCGATCAAGG CAATATCGTC CATGCATCCG ATACAACGGG CCTGGTCGTC
GTCACGCAGA TCCATCCCAT TTCCGTCATT TTCACTTTGC CGGAAAATCA ACTCGATACC
CTCAAGACAG CGATGAAATC CGGTCCCGTC ACGATCCATG CGATGAGCCG CGACGGCAAA
CAGGCCTTGG CGGATGGCAA GCTGGCCGTG CTCGACAATC TGATCGATCA GACGACAGGC
ACGCTCCGTC TCAAGGGTAT TTTTCTGAAC CAGGATGGTA TCCTTTGGCC GGGTGAATTC
GTGTCCATCC GTCTGCTCGC GCGGACGCAA CCAGAGGCGA TCATCATCCC CTCTACCGCG
CTGCAACGCG GGCCTGAAGG CTATTATGTT TACGCCGTCA AGCCGGATCA GACCGTCGAA
ATACGTCCCC TTGATATCGG CCAGATCGCC AATGGTGTTG CCATCGTCAA TGCCGGTTTG
CACCTCGGCG AACCAGTGGT CACGGCTGGC CAATATCGCC TGGCTCCTGG GGTTCGCGTC
GAAGCTCGAA CCACTCAGGC ATCGCGCTGA
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| Protein sequence | MQAQPSTRPR RSYLLPSFVA LIVAAGGYSL WHMRASESSQ IAAKGDSLTP AVPVQTTLAE
QRDVPVYLTG IGHVQAFNTV TIKTRVDGQL QKVAFTEGQD VKAGDLLAQI DPRPYRAALD
QAMAKKVQDE ALLANARLDL QRYINLTKND MGASRQQLDT QKAQVAQLEA QIRGDQALIE
NAQTQLGYTS ITSPIDGEIG IRLVDQGNIV HASDTTGLVV VTQIHPISVI FTLPENQLDT
LKTAMKSGPV TIHAMSRDGK QALADGKLAV LDNLIDQTTG TLRLKGIFLN QDGILWPGEF
VSIRLLARTQ PEAIIIPSTA LQRGPEGYYV YAVKPDQTVE IRPLDIGQIA NGVAIVNAGL
HLGEPVVTAG QYRLAPGVRV EARTTQASR
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