Gene Bind_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1166 
Symbol 
ID6198133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1347999 
End bp1350296 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content52% 
IMG OID641705159 
ProductTonB-dependent receptor 
Protein accessionYP_001832297 
Protein GI182678151 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4772] Outer membrane receptor for Fe3+-dicitrate 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGGT TTAAGAACAT TCAAAAGATG GCTTTCCGCC ATCTTCTCTT GAGTACGGCG 
GCAGTCGAAA TCATCCTTTG CTTAGTGCCC AAAATCGCTC ACGCAGATCC CACGGAAATC
GGTTCGGTGG ATGTGACGGC GGTCTCCACC AGAGGTGGAC AAGGAAACGG CATCGGCTTT
TCGGCAGCCC CCGGCAGCGC CCCAGCACTG GCTCCCTCGC AAGCACCGCT CAATTCGATT
CAACCCCGCG CTGTGGTCAG CGATAAATTC ATCCAGGACG TTCTGGTACC GACAGCCGAT
TTTTCCTCGA TCGTGCAGTA CACACCCGGC GTCGCCACAC GTCAGCCAAA CGGACCATTG
GGTGGGGGTG AGAACGGGCT AAGCATTCGC GGCTTCGGCG ATGGCCAATT CAATATTACC
TTTGATGGCA TTCCCTTCGC TGATCCTTCA GATTTCTCCC ATCATACTGG CGCCTATTTT
CCCGGCTTCT TTCTCGGTCA GGTGGCCGTC GACCGCGGTC CCGGTCTCGC CAGCACAATC
GGCTATGCCA CATTCGGCGG CACGATCGCA CTCAATTCGA AGCTTGTGAC CGACGAATTC
GGTGGCAGGG TCCAAGGTTC TTATGGTTCG TTCAGTTCGT GGACGACCGC GGGCGAGGTC
CGCACTGGCG TCACGAACCC AACTGGAACG CGCGCGCTTC TGGATTTCTC CCATTCCCAA
ACGGCTGGTG CTCTCCAATA TGGAAACACT GATCAGACCA GTTTCCTCGC CAAGATTGAG
CAGCCGCTCG GTGACTCCAC TACAGTAACA GCGCTTGCGA CTTATACGGA TAGTTTCAAC
TTTAGCGCCA CAAGCATATC ACCCGTCCAA ACCGCTCTTT ACGGTAAGGG TTTTGGTGGT
CTCAACAATA ATCCAAACAC TCAGAATTTC TACAGCTATA ATTTCGCGAA GCGCGAGACC
GATCTGGAAT ATATCGGAAT CAAGTCCGTG GTGAATGACA TCACCATTGA CGACAAGGTC
TATTCCGTCG CCTTTCACGA TTATCAGCCA CAAGCCAAGA ATCTCGCCGG TAATAATCCG
GATGGATCCG CAGGCATTGG CGTCAAATTC CCCCTCGCAA GCGGTGGTAC ATACAACAAT
CCGAACGGCG TCCCTGGCAC ATTAAAACTC TATGATTTCC GTACCGTCGG TAACATTCTG
AGCGTCGCGA AGGATTTCAA CGCTGGTATC GCGTCAGGCA CCATGCGGGC CGGCTTATGG
TATGAACATG CCTGGGAACA TCAGTGGCGA CCGAATATGG TTTGGAACAC AGGCCAAACC
TTTACGCAGC TTGGTGCCGT CCCACCCACG GCCTATGCTT ATAATGTCTA CTCGCAAACC
GATAATTTCC AGCCGTCCCT GGAATATGAA TGGCGCCCGG TGGAAGGGCT TGCGATTACG
CCTGGCTATA AGCATATCAC CTATATTCGT CATCTCTCAG GACCGGTTAA TAGTGTAAGC
GGTGGTCCCC CGGCCTACGC TTCGGGAACC TATAATGCCG ACCTCGCCCT GGTCTCCTTG
AATTATCGAT TCAACGAGAA TTCCGCTGCT TATATGCAGA TTGCACAAGG CTTCCTTGCC
CCCAACCTCA GCTATCTGCA GGTATCCCAG CCGCAAGGTA ACAATTTCAA ACCCCAACAA
ACGATGAATT ATCAATTGGG CTATGTGTAC AAATCAGATA ATATAACTGC CGATGTCGAT
GTCTATTATA TCGACTTCTC TAATCAGGTT GTTTCCGTCG GTAGTGGCAT CAATCAATAT
TATACCAATA TTGGCGGTGT CATCCGTAAA GGTATCGAAG GTCAGATCAC CTACGCCTTT
GGTAATGGTT TGGCGATCTT CGGCAGTGGC AGTCTCAACG ATGGCAGGAT GATCTCGACC
GGTTTAACAA GCCCAAGCAC GCCACGTTAT CTTGCCTCGG CCGGTCTCAT TTACGATAAT
AATGAAGGCT TCTTTGGGTC ATTCATCTCG CATTTCAACG GCTCGATGTT TACGGGAACG
GGTCAGAGCC TCACCAACAA TTACAACAAG GTAGCCCCCT GGACGACGAC CGATGTGGCC
TTCGGCTGGA AGATGTTCAA CATACCCGGC ATCCATAGCG CAAAGGTTCA ATTCGGCATC
GCCAATATTT TCGATAGCCG GCAGGCGACC AGTAACAGCA TCACACTCCT GTCAAACGGC
CAGCTCGACC CCTATAATTC GACTTATTTC TACATTCCAT CGCGCACCGC TTATGTTTCT
CTGTCCATGG ATTTCTGA
 
Protein sequence
MSGFKNIQKM AFRHLLLSTA AVEIILCLVP KIAHADPTEI GSVDVTAVST RGGQGNGIGF 
SAAPGSAPAL APSQAPLNSI QPRAVVSDKF IQDVLVPTAD FSSIVQYTPG VATRQPNGPL
GGGENGLSIR GFGDGQFNIT FDGIPFADPS DFSHHTGAYF PGFFLGQVAV DRGPGLASTI
GYATFGGTIA LNSKLVTDEF GGRVQGSYGS FSSWTTAGEV RTGVTNPTGT RALLDFSHSQ
TAGALQYGNT DQTSFLAKIE QPLGDSTTVT ALATYTDSFN FSATSISPVQ TALYGKGFGG
LNNNPNTQNF YSYNFAKRET DLEYIGIKSV VNDITIDDKV YSVAFHDYQP QAKNLAGNNP
DGSAGIGVKF PLASGGTYNN PNGVPGTLKL YDFRTVGNIL SVAKDFNAGI ASGTMRAGLW
YEHAWEHQWR PNMVWNTGQT FTQLGAVPPT AYAYNVYSQT DNFQPSLEYE WRPVEGLAIT
PGYKHITYIR HLSGPVNSVS GGPPAYASGT YNADLALVSL NYRFNENSAA YMQIAQGFLA
PNLSYLQVSQ PQGNNFKPQQ TMNYQLGYVY KSDNITADVD VYYIDFSNQV VSVGSGINQY
YTNIGGVIRK GIEGQITYAF GNGLAIFGSG SLNDGRMIST GLTSPSTPRY LASAGLIYDN
NEGFFGSFIS HFNGSMFTGT GQSLTNNYNK VAPWTTTDVA FGWKMFNIPG IHSAKVQFGI
ANIFDSRQAT SNSITLLSNG QLDPYNSTYF YIPSRTAYVS LSMDF