| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1160 |
|---|
| Symbol | |
|---|
| ID | 6201686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1341735 |
|---|
| End bp | 1342676 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641705153 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_001832291 |
|---|
| Protein GI | 182678145 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.262261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCACGA CTTGCGGCTG TGGCACCGGC GAGGTCAGGA TCGAGGGCGA AGCCGGTCAT
CATCATGACC ACGATCATGA CCATCATGCT CATCACCATC ATGGCCATAC ACATGATCAT
TCTCATGATC ATGATCATGC GCCTCCAGAA TCTCATGATC ACACCCATGC CGATGGGGCC
CTGGATTATG GCGCGGGCCC GGCGCGTTCG CATGCTCCAG GCCTCTCCCA GGCGCGGATG
ATCGAGATCG AGCAAGGCAT ACTCTCGAAG AATGATGGTC TCGCCGCGGG AAATCGCGCG
CGGCTGCGCC AGGATGGTGT TTTGGCGCTC AACCTTCTAG CGGGACCGGG CGCAGGTAAG
ACTACATTGC TGGTCGAAAC TTTGCGGCGC CTTAAAAGCC AGATCCCGGC GGCGGTGATC
GAGGGTGATC AGCAGACCAG CCATGATGCC GAGCGAATCC GGGCAACCGG CGCGCCGGCC
ATTCAAGTCA ATACCGGCAA GGGGTGCCAT CTCGATGCCC ATATGGTCGG CCATGCCATG
GCGCATTTGC CCCTGAATAT GGGTTCGGTG CTGTTTGTCG AGAATGTCGG CAATCTCGTT
TGCCCGGCTG CCTTCGATCT CGGCGAGCGG CGGCGCGTCA CCTTGCTCTC GGTCACCGAG
GGGGAAGATA AACCGCTCAA ATATCCGGAT ATTTTCGAAG GCGCGGATCT GGTACTTCTG
ACCAAAATCG ATCTCCTGCC GCATCTCGAT CTGGACCTTG CCGCATTGCG GGCCAATGTC
GCGCGGATTG CGCCTAAAGC CCAGGTGATC GCGCTTTCTA CGCGCTCGGG TGAAGGCATG
GAGGACTGGC TTGGCTGGTT GCGGGCGGAG CGACAGGCTT TTCTCGCGGA ATTGGCTGGT
GAGGCCGAGG CACGCGCAGC GCTGCTACGG GCGGCGGAAT AG
|
|---|
| Protein sequence | MCTTCGCGTG EVRIEGEAGH HHDHDHDHHA HHHHGHTHDH SHDHDHAPPE SHDHTHADGA
LDYGAGPARS HAPGLSQARM IEIEQGILSK NDGLAAGNRA RLRQDGVLAL NLLAGPGAGK
TTLLVETLRR LKSQIPAAVI EGDQQTSHDA ERIRATGAPA IQVNTGKGCH LDAHMVGHAM
AHLPLNMGSV LFVENVGNLV CPAAFDLGER RRVTLLSVTE GEDKPLKYPD IFEGADLVLL
TKIDLLPHLD LDLAALRANV ARIAPKAQVI ALSTRSGEGM EDWLGWLRAE RQAFLAELAG
EAEARAALLR AAE
|
|---|
| |