Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1139 |
Symbol | |
ID | 6198330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1319973 |
End bp | 1320839 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705132 |
Product | aminotransferase class IV |
Protein accession | YP_001832270 |
Protein GI | 182678124 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.092565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.580168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCTGT TTTGGAGTGA TGGCGCACTT TTCGAAACGG CGGTCCATCC CTACGATCTA ACCGATCGCG GCTTGCTGCT CGGTGACGGC CTGTTTGACA CCGCTCTGGT CCTGCGGGGA AAGGTGCATC GCGAGATGGC GCACCGGATG CGGCTTTTGG AGGGGCTCTC CGAGATCGGA ATCGCGATGG CGCCGGAAAT AATCATCGAG GCCTTCTCCG TTCTGGCCCA TGCCAGCCGC ACCAAAGGGA TCGAACGGGC CGCCCTGCGC GTGATGATTA CACGTGGCCC CGGTCCGCGC GGCCTCGGCC TGCCTCCCAC GCCTTTGCCG CATCTTTTGG CCAGTCTCGC GCCGCTCGCT AACAATCCGT CCGCGCCATT GACCCTGCAT GTCTCGAAGA TCAGGCGCAA CGAGACGTCG CCGCTGTCGC GTCTCAAAAC CCTGTCGTCC CTCGACGCCG TGCTGGCTCA TCGTGAGGCC TTGAACGCCG GTTGCGACGA AGCTCTGTGC CTCAATACAG CGGGGCGGAT CGCTTGCGCG GCCAGCGGTA ATCTTTTCGC GGTTTTTGGC CGTAAAATTC TCACCCCCAA GCTCGGCGAA GGGCTTTTGC CAGGCTGTAT CCGTGCTCTC CTGCTCGCAG AGGGCGCGTC CCTGGGCTAT GAAATGATCG AAACAGAGTT GGAATGTGAG CATTTGCTTG CGGCCGAGGC TGTCTTCATG ACCAATAGTC TGCGCCTGCT TGCGCCGGTT TCACGCATTG ACGATGTGTC TTTTGTATCT GCTTCCCATG CGGCTTTCGC CGCTTTGCGA GACTTTGTCT GGAGACATGC AGAGAATGAA TGTGGTGTCG CTAATCATGA TGTCTGA
|
Protein sequence | MPLFWSDGAL FETAVHPYDL TDRGLLLGDG LFDTALVLRG KVHREMAHRM RLLEGLSEIG IAMAPEIIIE AFSVLAHASR TKGIERAALR VMITRGPGPR GLGLPPTPLP HLLASLAPLA NNPSAPLTLH VSKIRRNETS PLSRLKTLSS LDAVLAHREA LNAGCDEALC LNTAGRIACA ASGNLFAVFG RKILTPKLGE GLLPGCIRAL LLAEGASLGY EMIETELECE HLLAAEAVFM TNSLRLLAPV SRIDDVSFVS ASHAAFAALR DFVWRHAENE CGVANHDV
|
| |