Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1071 |
Symbol | |
ID | 6199686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1228328 |
End bp | 1230052 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641705064 |
Product | ATP dependent DNA ligase |
Protein accession | YP_001832203 |
Protein GI | 182678057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.088062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCCT TCACCACGCT TCTCGACCGG CTGAGTTTCG AACATTCCCG CACCAATAAA TTGCGGCTGT TGCGGGATTT CTTCGCCAAT ACGCCCGATC CTGAACGCGG CTATGCCTTG GCGGCATTGA CCGGCTCCCT CAGTTTTCAA CAGGCCAAAC CCGGCCTGTT GCGCACCTTG ATCGCGACCA GGGTCGATTC CGTTCTCTTC GATCTCTCCT ATGATTTCGT CGGTGACCTG TCGGAAACCA TTGCTTTGCT CTGGCCAACG CCGACACAAA CAATCATCGA AGGCTCGAAC CAGCCGCCGC TGCTTCTCTC GGAAGTGGTG GAAGGGCTGC GCGGCGGCAA GCTTGATCTG CCGACTAGGA TCGCCTCCTG GCTCGACGCG CTGGACGAGA CAGGCCGCTG GGCGCTGCTC AAGCTCATCA CGGGTGCCTT GCGCATCGGC GTTTCAGCGC GGCTTGCGAA AACAGCGCTC GCCGAATGGG GTGGCCAGGA CGTCAACGAA ATCGAGGCGG TCTGGCACGG ACTTGAACCG CCCTATCTCG ATCTCTTCGC CTGGCTCGAA GGGCGCGAGG CGCGGCCAAA CAGCAAGGAC CCCGCGCCCT TTCATCCGGC CATGCTCGCC CATGCGATCA CGGAACAGGA TTTTGCGACA TTACATCCGC ACAATTTCCG TGCCGAATGG AAATGGGATG GCATCCGCGT GCAGGCCGTC ATCGGCCATC GCGAGAACGG GGTGCGGATC ACACGGCTCT ATACACGCAC CGGCGAGGAA ATTTCCAAGA CGTTTCCCGA TCTGGTCGAG GCACTCGATG CGCTCCCCTT CGACCGTTTC GCCATCGACG GCGAATTGCT GATCCTGCGC GATCACCACG TGCAGCCCTT TTCGGTCCTG CAACAAAGGC TCAACCGCAA AACGGTCTCG GCCAAATTGC TCGCCGATTT TCCTGCCCAT ATCCGCGCCT ATGATCTCCT GGGACTCAAT GGCGAGGACC TCCGGCCCCT GCCCTTTCTC GAACGCCGCG CGCGATTAAC ATCCTTCGTG GAAACAGCCG CGTCGCACCG TCTCGATCTC TCACCTATGA TCCCCTTCGA CACCTTTGAG GATCTCGCAG CGGCTCGTTC CGAGCCGGAA GCCCATGGAG CGGGAGATGA TGCAGAGGCG GTTGAAGGCG TGATGCTGAA GGAAGCACAT TCAATCTATA TCCCCGGCCG CCCGAAGGGT CTGTGGTACA AATGGAAGCG CGATCCATTT ACAGTCGATG CCGTTCTCAT GTATGCGCAG CGCGGACACG GCAAACGCTC TTCGCTCTAT TCCGATTACA CATTCGGCGT CTGGCGTGGT GATCCAGATT CTCGACATGA CACGGCGCAA CTCGTGCCAG TCGGCAAAGC CTATTCCGGC TTTACCGATG AAGAGCTCCA TCAGCTCGAT CATTATGTCC GCGCGCATAC AATCAATCGG TTTGGCCCGG TCCGCGTCGT GGAGCACGGC AAGGACGATG ACGGCACAAT CTCAGGCCTT GTCCTCGAAA TTGCCTTCGA GGGCCTGAAC CGTTCGAGCC GCCATAAATC GGGCCTTGCC ATGCGCTTTC CCCGTATCAA TCGCATCCGC TGGGACAAGC CGGCGCACGA AGCCGATCGG ATCGAAAGTC TGGAAATTCT GTTGCCGCAA AAACAGAATG CGGAAAAGCG TGTCTTCTCT CCGTTGATCC CTTAA
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Protein sequence | MKPFTTLLDR LSFEHSRTNK LRLLRDFFAN TPDPERGYAL AALTGSLSFQ QAKPGLLRTL IATRVDSVLF DLSYDFVGDL SETIALLWPT PTQTIIEGSN QPPLLLSEVV EGLRGGKLDL PTRIASWLDA LDETGRWALL KLITGALRIG VSARLAKTAL AEWGGQDVNE IEAVWHGLEP PYLDLFAWLE GREARPNSKD PAPFHPAMLA HAITEQDFAT LHPHNFRAEW KWDGIRVQAV IGHRENGVRI TRLYTRTGEE ISKTFPDLVE ALDALPFDRF AIDGELLILR DHHVQPFSVL QQRLNRKTVS AKLLADFPAH IRAYDLLGLN GEDLRPLPFL ERRARLTSFV ETAASHRLDL SPMIPFDTFE DLAAARSEPE AHGAGDDAEA VEGVMLKEAH SIYIPGRPKG LWYKWKRDPF TVDAVLMYAQ RGHGKRSSLY SDYTFGVWRG DPDSRHDTAQ LVPVGKAYSG FTDEELHQLD HYVRAHTINR FGPVRVVEHG KDDDGTISGL VLEIAFEGLN RSSRHKSGLA MRFPRINRIR WDKPAHEADR IESLEILLPQ KQNAEKRVFS PLIP
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