| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1040 |
|---|
| Symbol | |
|---|
| ID | 6198842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1192367 |
|---|
| End bp | 1193545 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641705032 |
|---|
| Product | acetylornithine deacetylase (ArgE) |
|---|
| Protein accession | YP_001832172 |
|---|
| Protein GI | 182678026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAATT CGCAAAATCC AGATGCCAGG CTGGGCGCTA CGCTCGACAT GCTTGAATGC
CTTATCAGCT TTGACACGGA GAGTTCGAAA TCGAATCTGC CCCTCGTTGC GGCGGTCGAG
GATTATCTTC GCGAACAAGC TGTTGACTAT GTCAAAGTCC CCAATGCGGA AGGGGATAAG
GCCGCCCTTT TCATCAGCAT TGGGCCGAAA GTGGATGGGG GCGTTGTCCT CTCCGGCCAT
ACGGATGTCG TGCCGGTTGA AGGGCAAAGC TGGACCAGCG ACCCGTTTAC CCTGCGCCGC
GAGGCTGACC GTGTATTCGG GCGCGGAACC TGTGACATGA AAGGTTTCGA CGCCCTCTGT
CTCGCCATGA TTCCGGAATT CAAACAGGCG CGGCTGGCGC GGCCGATCCA TATTCTGCTG
TCCTACGACG AGGAAATCGC CTGTACGGGC TCGCTGGATA CGATTGCTCG TTTCGGTCAT
GATCTGCCAC GTCCGGCGGC AGTGCTGGTG GGTGAACCAA CCCTGATGCA AGTCGCCGAC
GCCCACAAAA GTGTCGCCAC CTATCGCACG ACTGTTCACG GTCACGAGGC GCATTCCTCG
AAACCCTATC TCGGCGCCAG TGCTGTCGAA GCGGGCTGTG ATCTCGTGAC CGAGCTTTAT
CGTTTTGCCG AAGTTTTGGC CGCCGAAGGC GATCCGAGTG GCCGTTTCGA TCCACCCGCC
TCGACCATTC ATGTCGGCAC GATTCATGGC GGTACGGCGC GCAATATCCT TGCGAAGGAA
TGCAGTTTCC TTTGGGAGTT TCGTGGCCTG CCAGGCGTGG CGCAGGACCG TGCCTTGCGG
CACCTTGAAG ACTATGCCGC CCGTGTGGTT TTGCCGAAAA TGACCCGTTA TGCCCCCAAG
GCGTCCATCG AGACTCTGGT CGAGGTGGAA GTTCCGGGGC TTGCTCCAGA AACGGGCTCG
CAAGCCGAGA GCCTGGCCTT GAAACTCGCG CGTTCCAATC GGACCATTAC TGTGCCTTTC
GCCACGGAAG CCGGCCAATT TCAAAAGGCC GAAGTGCCGA CCATCGTTTG CGGCCCGGGC
TCGATCGACC AAGCGCATCA GCCGGATGAA TATATTGCCA TTGCCCAGAT CGAGGCCGGC
ATTGCCTTCA TGCGCCGGCT CGCGACCGAG ATGGGTTGA
|
|---|
| Protein sequence | MVNSQNPDAR LGATLDMLEC LISFDTESSK SNLPLVAAVE DYLREQAVDY VKVPNAEGDK
AALFISIGPK VDGGVVLSGH TDVVPVEGQS WTSDPFTLRR EADRVFGRGT CDMKGFDALC
LAMIPEFKQA RLARPIHILL SYDEEIACTG SLDTIARFGH DLPRPAAVLV GEPTLMQVAD
AHKSVATYRT TVHGHEAHSS KPYLGASAVE AGCDLVTELY RFAEVLAAEG DPSGRFDPPA
STIHVGTIHG GTARNILAKE CSFLWEFRGL PGVAQDRALR HLEDYAARVV LPKMTRYAPK
ASIETLVEVE VPGLAPETGS QAESLALKLA RSNRTITVPF ATEAGQFQKA EVPTIVCGPG
SIDQAHQPDE YIAIAQIEAG IAFMRRLATE MG
|
|---|
| |