Gene Bind_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1000 
Symbol 
ID6199446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1146514 
End bp1146849 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID641704991 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001832132 
Protein GI182677986 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.492649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACAC CTGCTTTCGC TCAGTCCGCC GGTGGTGCGG CGGGAGCGTC CGACATCATC 
CTGCAGGTGG CGCCTTTTGG CCTCATCCTT ATCATTATGT ATTTCCTGAT CATTCGGCCG
CAGCAGAAGC GGGCGAAGGA ACACGCCGAT CTCCTCAAGA ATATCCGGCG CGGTGATATG
GTCGTCATGA CCGGTGGCTT GATCGGCAAG GTTAGCAAGA TTTCCGACGA GGCCGAGGTC
GAGCTCGAAA TTGCGCCGAA TGTCAAAGTC AGGGTTGTAC GCACGATGAT CGCCGAAGTG
CGTTCCAAGG GTGAGCCGGT CAAGGATCAG GCGTGA
 
Protein sequence
MITPAFAQSA GGAAGASDII LQVAPFGLIL IIMYFLIIRP QQKRAKEHAD LLKNIRRGDM 
VVMTGGLIGK VSKISDEAEV ELEIAPNVKV RVVRTMIAEV RSKGEPVKDQ A