| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0998 |
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| Symbol | |
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| ID | 6200161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1144142 |
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| End bp | 1145152 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641704989 |
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| Product | YjbN family TIM-barrel protein |
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| Protein accession | YP_001832130 |
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| Protein GI | 182677984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.420322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT TTCAATCGTA TAGATTTTCC GTCGCGCCGA TGATGGAATG GACCGATCGG
CATTGCCGCG TTTTTCATCG GCTTTTGTCG CGTCGGGCGC TCCTTTATAC GGAGATGATT
ACAACGGCGG CATTGCTGCA TGGTCACGTC GATCGTTTGC TTGGCTTTGA TGATGTCGAA
CATCCCGTTG CTGTGCAACT CGGCGGTTCT GAACCGCGCG ATCTGGCGGC GGCGGCACGC
ATTTGCGCGG ATTTCGGCTA TGACGAAATC AATCTCAATA TCGGCTGTCC CTCGGAGCGC
GTGCAGAACG GGGCTTTCGG AGCCTGTCTC ATGCTGGAAC CGGAGCTGGT TGGGGATTGT
GTCGCGGCGA TCAAGGCGAG CGTTTCCTTG CCGGTCACGG TCAAATGTCG GATCGGTGTC
GATGACCAGG ACCCGGAGGA AGCCTTGGGG ACTTTGAGCG CGGCGATCAT TGCCGCGGGC
GTCGACGGGA TTATCGTCCA TGCCCGCAAG GCCTGGCTCA AGGGTCTGTC GCCGCGCCAG
AACCGCGATG TGCCCCCACT CGATTATCCG CTCGTTCATG CCTTGAAGCG GACCTATCCC
GAGATACCGA TCATGATTAA TGGTGGGCTG GTGACGCATG AATCCATGCA GGAGCAGCTT
CGCCATGTCG ATGGGGTGAT GGTCGGGCGC CAAGCTTATC AGGAGCCGGC CATGCTGCTC
TCGGTCGATC CGCTGTTTTT TGGCGAGGAG GCTCCGCTCA CCGACGCCAC GGATGTAGTC
GAGGCTTTCA TTCCCTATGT CGAAGCGCGG CGGGCCGAAG GGGTGCCGCT GCACTCCATG
ACACGGCATA TTCTGGGCCT GTTCAACGGG CGGCCGGGCG CGCGGGCCTT TCGGCGCCAT
CTCGCCACGG AAGGTCTGGC ACGTGATGCG GGCGCCGACG TTCTGCGGGC CGCCGCTGCG
CATGTGGTCA AGGCGAGGAG CTTTCGGCCC GTCGAGGCTG TATCAGGCTG A
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| Protein sequence | MKQFQSYRFS VAPMMEWTDR HCRVFHRLLS RRALLYTEMI TTAALLHGHV DRLLGFDDVE
HPVAVQLGGS EPRDLAAAAR ICADFGYDEI NLNIGCPSER VQNGAFGACL MLEPELVGDC
VAAIKASVSL PVTVKCRIGV DDQDPEEALG TLSAAIIAAG VDGIIVHARK AWLKGLSPRQ
NRDVPPLDYP LVHALKRTYP EIPIMINGGL VTHESMQEQL RHVDGVMVGR QAYQEPAMLL
SVDPLFFGEE APLTDATDVV EAFIPYVEAR RAEGVPLHSM TRHILGLFNG RPGARAFRRH
LATEGLARDA GADVLRAAAA HVVKARSFRP VEAVSG
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