| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0973 |
|---|
| Symbol | |
|---|
| ID | 6200656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1112372 |
|---|
| End bp | 1114588 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641704965 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_001832106 |
|---|
| Protein GI | 182677960 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.281287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGC AGACAGACGA CAAGGCCCAG GGCAAATGCC CGTTTGTGCA TGCGGAACAC
GGCAGGACGA ACCGGGATTG GTGGCCCAAG CAGCCCAATC TTCAGATCCT TCACCAGAAT
TCTAGCCTGT CCAACCCGAT GGGCGAAGCG TTCGACTATG CGAAGGAGTT CAAGAGCCTG
GATCTGAATG CTGTTATCGC GGACCTGAAG GCCCTGATGA CCGACTCCCA AGACTGGTGG
CCGGCGGATT TCGGCCATTA TGGCGGTCTG TTCATCCGCA TGGCCTGGCA CAGCGCCGGC
ACCTACCGCA TTGGGGATGG GCGTGGCGGC GCAGGCGGCG GGCAGCAGCG TTTCGCGCCG
CTCAATAGCT GGCCGGATAA TGTGAGTCTG GACAAGGCGC GCCGCTTGCT TTGGCCCATC
AAACAAAAAT ATGGCCGCAA GATTTCCTGG GCGGACTTGA TGATATTGAC CGGAAATGTC
GCGCTGGAAT CGATGGGCTT CAAGACATTC GGTTTCGCCG GCGGGCGCAT CGACACATGG
GAGCCGGATC AGTCCGCTTA TTGGGGGGCG GAGACCACAT GGCTCGCCCT CAGCAATGAT
CCCAACAACA AGCACAGCCG TTATTCCGGT GACCGCGACC TTGAAAACCC GCTGGCCGCC
GTGCAGATGG GGTTGATCTA TGTGAATCCG GAAGGGCCGG ATGGCAATCC TGATCCGTTG
GCTGCCGCCC GCGACATTCG CGAAACCTTC GCGCGCATGG CGATGAATGA TGAGGAAACC
GTCGCGTTGA TCGCGGGCGG GCATACATTC GGCAAGACCC ATGGCGCAGG CCCGGCCGAT
CATGTCGGTT CCGAGCCGGA GGCTGCCGCG GTGGAGCAGC AGGGGCTGGG CTGGAAGAGC
AGCTTCGGCA CCGGCGTGGG CAAGGATGCG ATCACGAGCG GGCTGGAGGT GATCTGGACC
CAGACTCCCA TCCAATGGAG CAACCACTAT CTCGAAAACC TGTTCGGCTT TGAATGGGAA
CTCACCAAGA GTCCCGCGGG CGCGCATCAA TGGCGGCCCA AGAACGGTGC GGGTGCCGGC
AGCGTGCCGG ATGCGTTCGA CCCGAATAAG CGCCATGCGC CCTCGATGCT GACCACCGAT
CTCGCCCTGC GCGCAGACCC GGCCTATGAG AAAATCGCCC GCCGTTACCT CGAAAATCCC
GCCGAATTCG CGGATGCATT TGCGCGTGCC TGGTTCAAGC TGACGCATCG CGATATGGGG
CCCCGCGCGC GCTATCTCGG GCCGCTCGTG CCCGAGGAGG AGCTGATCTG GCAGGATCCG
GTTCCGGCCG TGGACCATCC GCTGGTCGAT GAGGCGGATG TGGTGGCGCT GAAGGAGAAA
ATCCTGTCGT CCGGCCTCAC CGTGGCCGAA CTGGTTTCGA CCGCCTGGGC CTCCGCCTCC
ACGTTCCGCG GCTCCGACAA GCGCGGCGGC GCCAATGGCG CGCGCATCCT CTTGGCGCCG
CAGAAGGACT GGGCGGTGAA TGAGCCGCAG AAGCTCGACA AGGTGTTGAA GGCACTGGAG
GTGATCCAGG CCGATTTCAA CGCCGCGCTG AGCGGCGGCA AAAAGATCTC GCTGGCCGAT
CTCATTATAC TGGCGGGTGG TGCTGCGATC GAGAAAGCCG CGAGCGAGGC GGGCCAAAAA
ATCACTGTGC CCTTCGCGCC GGGGCGCACG GATGCCTCCC AGGAGCAGAC GGATGTTCAT
TCCTTCGCGC CGCTGGAGCC TCCGGCCGAT GGGTTCCGTA ATGACGTGCC CGCCAAGCTG
GCGGAAATCT CTGGGCATCT GCTGGTGGAC CGCGCACAGC TTCTGACCCT GACGGCGCCG
GAAATGACCG TGCTGATCGG CGGCCTGCGG GTGCTGGGCG CTAATACGGG TGGCTCGAAG
CATGGCGTGT TCACTACGCG GCCCGGCGTG CTGAGCAATG ATTTCTTCAC CAATCTGCTC
GACATGGGGA CCGAATGGAA ACCCGCCGCC GAGGACGGTG TCTATGAGGG CCATGACCGC
AAGACCAAGG CGGTGAAATG GACCGCCACC AGAGTGGATC TGCTGTTCGG CTCCCATGCG
CAGCTACGTG CCCTGGCCGA AGTTTATGGC TGCGCGGACG CGCAGACGAA ATTCGTGACG
GATTTCGTGG CTGCTTGGAC AAAGGTCATG AACGCCGACC GGTTCGATCT CATCTGA
|
|---|
| Protein sequence | MDAQTDDKAQ GKCPFVHAEH GRTNRDWWPK QPNLQILHQN SSLSNPMGEA FDYAKEFKSL
DLNAVIADLK ALMTDSQDWW PADFGHYGGL FIRMAWHSAG TYRIGDGRGG AGGGQQRFAP
LNSWPDNVSL DKARRLLWPI KQKYGRKISW ADLMILTGNV ALESMGFKTF GFAGGRIDTW
EPDQSAYWGA ETTWLALSND PNNKHSRYSG DRDLENPLAA VQMGLIYVNP EGPDGNPDPL
AAARDIRETF ARMAMNDEET VALIAGGHTF GKTHGAGPAD HVGSEPEAAA VEQQGLGWKS
SFGTGVGKDA ITSGLEVIWT QTPIQWSNHY LENLFGFEWE LTKSPAGAHQ WRPKNGAGAG
SVPDAFDPNK RHAPSMLTTD LALRADPAYE KIARRYLENP AEFADAFARA WFKLTHRDMG
PRARYLGPLV PEEELIWQDP VPAVDHPLVD EADVVALKEK ILSSGLTVAE LVSTAWASAS
TFRGSDKRGG ANGARILLAP QKDWAVNEPQ KLDKVLKALE VIQADFNAAL SGGKKISLAD
LIILAGGAAI EKAASEAGQK ITVPFAPGRT DASQEQTDVH SFAPLEPPAD GFRNDVPAKL
AEISGHLLVD RAQLLTLTAP EMTVLIGGLR VLGANTGGSK HGVFTTRPGV LSNDFFTNLL
DMGTEWKPAA EDGVYEGHDR KTKAVKWTAT RVDLLFGSHA QLRALAEVYG CADAQTKFVT
DFVAAWTKVM NADRFDLI
|
|---|
| |