| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0931 |
|---|
| Symbol | |
|---|
| ID | 6201793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1063055 |
|---|
| End bp | 1066072 |
|---|
| Gene Length | 3018 bp |
|---|
| Protein Length | 1005 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641704928 |
|---|
| Product | ribonuclease |
|---|
| Protein accession | YP_001832069 |
|---|
| Protein GI | 182677923 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.589799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA AAATGCTTAT CGATGCCTCC CATCCGGAAG AGACCCGGGT GGTGGTTCTG
CGTGGTAATC GCGTCGAGGA ATTCGATTTC GAATCCGCCA GTAAAAAACA GCTTCGCGGC
AATATCTATC TTGCCAAAGT CACCCGGGTC GAGCCGTCCC TGCAGGCCGC TTTCGTCGAC
TATGGCGGCA ATCGCCATGG CTTCCTGGCC TTTTCCGAAA TCCACCCGGA TTATTATCAG
ATTCCTGTCG TCGACCGTCA GGCTTTGATC GAAGAAGAGG CACGCGCCCA ACACGAAGAA
GATGAGGAGC CACAGGCTCC ACGCCGCAGC CGGCGCTATC GCCGCGGTGA CCGCAACGGC
CAGCGCGCCG CCGAGAAACG GCGCAATGAA GACGACGTGC TGGCCCTATC CCCCGTCTTG
CCCGAAGCGG TTGAACCCGC GCCCGACCAG GCGGAAATGA CCGACGAACC GCAAGCCTTT
TACACGGCGG ATTCAACGGA TCATTTTCCC CATTTCGAGA ACGGAGCGGT AGAGACACCG
GACGCCGACG AGACGCAGGC GGACGAACCC TTTCTCTTCC CGCCCCACGA AACCACTGCG
GAGGAGTTAC AACCGAGCTT CCAATCGAGC TTCCCGGCAA GCGAGGAGGA GCCCGCCGAT
TTCACGCGCC ACGAGCAGCG GGAAGTCTCA AGCGACGAGA ACGACGAAGC GCCTTCGGAG
GAGCTCCCCT TCAACGCAAC GGAATTGGCC GGCACGGCTG TGGCCGCCCC GGAAGCAATT
CCGACACGCG ATGATTTCGG CAACGATTTC AATGACGACG AGGGAGATGA AGGGGACGAG
ACCGAGGAAG AAGACGAGCA GGTCGAGCAG ATCGGCGGCG ACAGCGATGC CATGGAAGAA
GCCATGCATC GCGCCCCCCG CTATCGCCGG CAATATAAGA TTCAAGAGGT CATCAAGCGG
CGCCAGATCC TTCTCGTCCA GGTGGTGAAG GAAGAACGTG GCAACAAAGG CGCCGCGCTA
ACCACTTATC TTTCGCTCGC CGGACGCTAT TCCGTCCTGA TGCCGAATAC GGCCCGTGGC
GGCGGCATTT CCCGCAAGAT CACCGATGCG GGCGACCGGC AGCGGCTGAA GGCCATCGCC
CAGGAACTCG AAGTGCCGGA AGGCATGGGC GTCATCCTGC GCACGGCTGG CGCCGCGCGC
ACCAAGGCCG AGGTCAAGCG CGATTTCGAA TATCTCCTGC GCATGTGGGA AACCGTGCGC
GAAATGACCT TGAAATCCAC GGCCCCGACC CTCGTCTATG AAGAAGGATC GCTGATCAAG
CGCGCCATCC GCGATCTCTA CAATAAGGAT ATCGACGAAA TCATCGTCTC GGGCGAGGCT
GGCTATCGCG AGGCCAAGGA CTTCATGCGC ATGCTCATGC CGAGCCATGC CAAAAGCGTC
CAGCTCTATC GCGATCCGCA ACCGATCTTT GCCAAGGCAG GTGCCGAGGC TCAGCTCGAC
GCCATGTTCT CGAACCAGGT CACCTTGCGG TCGGGCGGTT ATCTCGTCAT CAACCAGACC
GAGGCGCTTG TCGCGATCGA CGTCAATTCC GGCCGCTCGA CGCGCGAACA TAATATCGAG
GACACGGCCG TCCGCACCAA TCTCGAGGCT GCCGATGAAA TCGCCCGGCA ATTGCGCCTG
CGCGATCTCG CCGGTCTCAT CGTTGCCGAT TTCATCGACA TGGAGGAAGG CCGCAACAAT
CGCGCGGTGG AACGCCGGTT GAAGGAAGCC CTCAAGAACG ATCGCGCCCG TATTCAGGTC
GGACGCATCT CGCATTTCGG CCTGCTCGAA ATGTCACGCC AGCGCATCCG CACCGGCGTT
TTCGAGGGCT CGACCGTTAT ATGTCCGCAT TGCCTCGGCG CCGGCATGGT GCGTTCAACC
AGCTCGATCG CCCTGCATGT GCTGCGGCTG CTCGAGGATG CGCTGATCAA GAATGCCGCC
TATGACATTA CCGTCAAGAC GCGCACGGTC ATCGCGCTCT ATATCCTCAA TCAGAAACGC
ACGAATCTGC GCGAATTGGA GCAACGTTTC GGAGTGAGCA TCACGGTCGC GGCGGACGAG
AGCCTGACCG GAATGACCTA TCACGCTTTG GAACGCGGCG AACTCGCCAG CGGCACCAAG
CTGCCCGTGC GGGAAACAGC TATCGGACCG GCCGATATCT TCCCTCTCGA CGAGGAAGAA
GAGATCGAAA TGGAGGCCGA GGAGCTGGAA CCCGTCTCCG GTTCGGATGA GGGTTCGAAC
GAGGACGAGG AAGCCACCGC CGAAGCCGAG GGTGAAACGG AGGCCGATGG CCGCGCTCGC
CGTCGCCGTC GCAAGCGCCG CCGTGGCGGG CGTGGCAGCG ACCGGGAAGG GTCAGGCATT
GCCGCCAATG CACCGCAACC GTCCGATGAT GCCTTGGGCC TGATCGCAGG CATGTCGCCT
TATGCCGCTG CGGATGACGA AAACGCCGCG GCCTTCACAG CGAGCGAAGC AGAGGAAACT
CGCGACGAGG AAACCGAAGG TGCGGAGACC GTGGAGGCAA AGGGCGAGGA CATAGCCCCC
GCGCCGAACC GCAGGCCGCG CCGTTCCCGC TCACGCGGAC CAAGACGGGC CAATGCGGAA
GCGGCCGAGT CATCGGCAGG TTCAGCGACA GAGACGGCGA TTTCGCAGGA ACCTTTTGAG
CCAGAAAGCT CGCTTCCATC AACAGGTGCC GAAGCTGAAC ACTTGGCTCC ATCTCAACCT
GTGGAGCTGA GCCACGCCGA AGATTTTGCC CCCGTGCTAT CCCCGGCTGC ACCAGAGGAA
CCGCATATTG TGGAAAGCGT CCCGGTTGCT CCGGTGGCCT TGCCCATGAT CGTGCCCGAG
CAAGGGAGCA CGGCGCTTGT GCCCGTCGAA GCGGAAGCGG AAACGGCCTC GATCACGCCC
CCCGTTGAGG AAAGCGGTCC GCCGCAACCC AAACGCTCCG GCTGGTGGCA AAGAGCCAAG
GCCAGTCTGC GGGGCTGA
|
|---|
| Protein sequence | MANKMLIDAS HPEETRVVVL RGNRVEEFDF ESASKKQLRG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FSEIHPDYYQ IPVVDRQALI EEEARAQHEE DEEPQAPRRS RRYRRGDRNG
QRAAEKRRNE DDVLALSPVL PEAVEPAPDQ AEMTDEPQAF YTADSTDHFP HFENGAVETP
DADETQADEP FLFPPHETTA EELQPSFQSS FPASEEEPAD FTRHEQREVS SDENDEAPSE
ELPFNATELA GTAVAAPEAI PTRDDFGNDF NDDEGDEGDE TEEEDEQVEQ IGGDSDAMEE
AMHRAPRYRR QYKIQEVIKR RQILLVQVVK EERGNKGAAL TTYLSLAGRY SVLMPNTARG
GGISRKITDA GDRQRLKAIA QELEVPEGMG VILRTAGAAR TKAEVKRDFE YLLRMWETVR
EMTLKSTAPT LVYEEGSLIK RAIRDLYNKD IDEIIVSGEA GYREAKDFMR MLMPSHAKSV
QLYRDPQPIF AKAGAEAQLD AMFSNQVTLR SGGYLVINQT EALVAIDVNS GRSTREHNIE
DTAVRTNLEA ADEIARQLRL RDLAGLIVAD FIDMEEGRNN RAVERRLKEA LKNDRARIQV
GRISHFGLLE MSRQRIRTGV FEGSTVICPH CLGAGMVRST SSIALHVLRL LEDALIKNAA
YDITVKTRTV IALYILNQKR TNLRELEQRF GVSITVAADE SLTGMTYHAL ERGELASGTK
LPVRETAIGP ADIFPLDEEE EIEMEAEELE PVSGSDEGSN EDEEATAEAE GETEADGRAR
RRRRKRRRGG RGSDREGSGI AANAPQPSDD ALGLIAGMSP YAAADDENAA AFTASEAEET
RDEETEGAET VEAKGEDIAP APNRRPRRSR SRGPRRANAE AAESSAGSAT ETAISQEPFE
PESSLPSTGA EAEHLAPSQP VELSHAEDFA PVLSPAAPEE PHIVESVPVA PVALPMIVPE
QGSTALVPVE AEAETASITP PVEESGPPQP KRSGWWQRAK ASLRG
|
|---|
| |