Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0912 |
Symbol | |
ID | 6200917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1043311 |
End bp | 1044528 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641704909 |
Product | major facilitator transporter |
Protein accession | YP_001832050 |
Protein GI | 182677904 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.973164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.300944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCG GCGGCAAGGC AAAATTCGCT GTGAAAGGGC TGTCACCGGC CCTGACGCTC GCTTGTGCCG TAGCCTGCGG CACCATGGTC GCCAATCTCT ATTATGCGCA GCCGCTGGTT GATCTGATCG CACCCGACCT CGGCCTCGAT GAGAGTTATG CTGGCCTGAT CGTGACTTTG ACGCAGCTCG GCTATGGCGC GGGCCTGCTC CTGCTCGTGC CTCTGGCCGA TTGCCTCGAC AATCGGCGTC TGATCCTGAG CACTTTGCTC GCAACCGCTG TCGCACTGGT CGGCGTCGCG ACGGCCCCCT CCGAATTTCT TTTCCTCGTT GCCACGATTC TGGTGGGAGT CTGCGCATCG GGAGCCCAGG TCATCGTTCC CTTCACGGCC TCCCTGGTGC CCGAGGAAAT CCGCGGCCAG ACGATCGGCA ATGTCATGGC GGGCCTGCTC ACCGGCATCA TGCTGGCGCG ACCGGCCGCC AGCCTCATCG CCAATTATGC AGGCTGGCGC GCGGTTTTTT GGATTTCGAG CGGATTGATG CTGCTCCTGT TCACCTGGCT CGCCAAAACC CTGCCGAGCT ACCGGCTGCA AGAGCGTGAT CATTATAGCA AGATCCTGCG TTCCATGGGC CATATTCTGG TCAGTTCGCG CCCACTTCAA CGCCGCGCGA TCTATCAGGG CATAGCCTTC ATGGTGTTCA ATCTGTTCTG GACCGCCTCA CCGCTGGTGC TGACACATCG TTTCGACTTC GATCAGAAGG ATATTGCTCT CTTCGCCCTG GCAGGCGCTG GCGGCGCCCT CGCCGCCCCG GTTGCGGGAC GGCTCGGCGA TCGCGGCTAT GTGCGTGCCG GAACCGCTGT GGCCTTGAGC ACGATCACGC TGAGTTGCCT GTTCTCCGGG TTCGCGGTCT CATGGCACTG GCTGACGCCG CTCGTCATTT TCGCGGTGAC GCTTGATGCC GCCGTGCAGC TCAACCAGAT TCTGAGCCAG CGCGTGATCT TTTCCCTGCC AGGCCATGCA AGGGGGCGAT TGAACGCCAT CTATATGACA ATCGTCTTCC TGCTCGGCGC CATGGGCTCG GCCGTCGCAA CCTTCACCTA TCATGAAGGC GGTTGGTGGA TGACGGCGCT AACCGGCACG GGATTAGGCT TGCTGGTAAC GGGCCTTTTC GCAACCGAAT GGGTCAAACC CACAAAGACA CACAAGCTGA AGAGATAA
|
Protein sequence | MSAGGKAKFA VKGLSPALTL ACAVACGTMV ANLYYAQPLV DLIAPDLGLD ESYAGLIVTL TQLGYGAGLL LLVPLADCLD NRRLILSTLL ATAVALVGVA TAPSEFLFLV ATILVGVCAS GAQVIVPFTA SLVPEEIRGQ TIGNVMAGLL TGIMLARPAA SLIANYAGWR AVFWISSGLM LLLFTWLAKT LPSYRLQERD HYSKILRSMG HILVSSRPLQ RRAIYQGIAF MVFNLFWTAS PLVLTHRFDF DQKDIALFAL AGAGGALAAP VAGRLGDRGY VRAGTAVALS TITLSCLFSG FAVSWHWLTP LVIFAVTLDA AVQLNQILSQ RVIFSLPGHA RGRLNAIYMT IVFLLGAMGS AVATFTYHEG GWWMTALTGT GLGLLVTGLF ATEWVKPTKT HKLKR
|
| |