| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0908 |
|---|
| Symbol | |
|---|
| ID | 6201815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1038729 |
|---|
| End bp | 1040735 |
|---|
| Gene Length | 2007 bp |
|---|
| Protein Length | 668 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641704905 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_001832046 |
|---|
| Protein GI | 182677900 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01342] aconitate hydratase, putative, Aquifex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.410888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.460369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGA ATGTCAGTCA GAAATTGATC GGCTCCCATC TCGTCGACGG TGTGATGAAC
CCCGGCGCAC CCATTACGCT GCGCATCGAC CAGACCCTCA CGCAGGACGC CACCGGCACC
TTGGTGATGC TGACGCTCGA GGCAATGGAG CTCGACCATG TCAAAACCGA AGTCAGCGTT
CAATATGTCG ATCATAATCT GTTGCAGATC GACAATCTGA ACGCAGATGA TCACCTGTTC
CTCGAAAGCG CTTGCCGTCG GTTCGGGATC TGGTATTCGC GGCCAGGCAA TGGCATCAGC
CATGTCGTTC ATATGGAACG CTTCGGCCGT CCCGGAAAAT CCCTGCTCGG GTCCGACAGC
CATACACCGG CAGCGGGTTC TCTCAGCATG CTCGCGATCG GTGCCGGAGG GCTCGATGTG
GCGCTCGCCA TGGCTGGCGA GCCTTATCCG ACCGCCATGC CAAGAATTTT CGGGGTCGAG
CTCAAAGGCG CGCTGCCCGA TTGGGTGAGC GCCAAGGATG TCATCCTTGA AATGTTGCGC
CGTCATGGCG TCTCTGGCGG TGTCGGCAAG ATCATTGAAT ATTATGGCCC AGGCCTCGAT
TGTTTGAGCG CGATGGACAG ACATGTCATC GCCAATATGG GCGCGGAGCT TGGCGCGACC
ACCACAGTCT TTCCTTCCGA TGAGGAGACG AAGAAATTTC TGGAAGCGCG CGGGCGCGGA
CGGGATTGGT GCGCGATAGC GGCCGACCCA GGATGCGAGT ATGATGATCA CGACGAGATT
GATCTCTCAA AGCTCGAACC GCTCATCGCC CAGCCCTCGA GCCCCGGCAA TGTCGTGGCC
GTCAAGGATA TAGAGGGAGA AGACATCTAT CAGGCCTATA TCGGTTCCTC GGCCAATCCA
GGATGGCGTG ACTTCGCCGT GGCGGCGGAG ATCGTGCGCG GCAAGAGCAT TCCCGCCCAT
GTCTCCTTCG ATGTGAACCC GACATCGCGC CAAGGCCTCG AAATCCTGGT CGCCGATGGA
CATCTTAACG ATCTTCTCGT GGCCGGCGCG CGCATCCATC AGACGGGATG CAACGGCTGC
ATCGGCATGG GCCAGGCACC GGCGATCGGA AAAAACTCGC TGCGCACAAC CCCACGCAAT
TTTCCTGGCC GCTCTGGGAC AGAGGAAGAC GCGGTCTTCC TCTGTTCACC GGAAACCGCC
GCAGCCTCCG CACTCACCGG CAAAATCACC GATCCACGTT CGCTGTCCAT GAGCTATCCA
AGATTGCGGG AGGCAGAGTC CATCGCCATG ACATCATCCT TGATCGCGTC GCCGCTTTCC
TTCGAGGAAG CACGGCGGGT CACGCTGGTG AAGGGACCGA ATATTCGCTC CCTGCCCACA
CTCGATCCTC TGCCGGATAG TCTGGACCTC CCGATCCTGC TCAAAATGGG AGACAATGTC
TCCACCGATG AAATCATGCC AGCGGGCGCG AAAGTGTTGC CCTATCGTTC GAATATCGAA
AAGATTGCAA CCTTTTCCTT CGAGCGCATA GACGAAACCT ATGTCGAGCG GACCCGCACG
GTGCCAGGGC ACGCGGTCAT CGCCGGCAGG AATTACGGTC AAGGATCATC ACGCGAACAT
GCAGCGGTCG GGCCGCGCAG CTTGGGGCTG AGACTTGTGC TTGCCAAAAG CTTTGCCCGC
ATACATCGGC AAAATCTGAT CAATTACGGA GTCCTGCCGC TCGTGTTCGT CGAGCCAAAG
GATTATGACT CGCTCGAAAA AGACGATGTT CTGGCAGTGC GTGATCTACG CCGCATACTC
GAAAAAGGCG ACGAGGTTGT TGCGCTGGAG AGCAAAGGCG CCACCAAGGG CGTGATCCTG
GCCCGGCACG GACTGACGCC AAAGCAGATC GAAATCATCC TTGCGGGTGG GGTGACCAAT
TTGCGGCGGA ACGCGAGCAA ATTGCCCCCA ACCGAGGGGG CGGGCACACA GCGCATCATC
GAGCATGATG CGCTCATCGT TCACTAA
|
|---|
| Protein sequence | MAQNVSQKLI GSHLVDGVMN PGAPITLRID QTLTQDATGT LVMLTLEAME LDHVKTEVSV
QYVDHNLLQI DNLNADDHLF LESACRRFGI WYSRPGNGIS HVVHMERFGR PGKSLLGSDS
HTPAAGSLSM LAIGAGGLDV ALAMAGEPYP TAMPRIFGVE LKGALPDWVS AKDVILEMLR
RHGVSGGVGK IIEYYGPGLD CLSAMDRHVI ANMGAELGAT TTVFPSDEET KKFLEARGRG
RDWCAIAADP GCEYDDHDEI DLSKLEPLIA QPSSPGNVVA VKDIEGEDIY QAYIGSSANP
GWRDFAVAAE IVRGKSIPAH VSFDVNPTSR QGLEILVADG HLNDLLVAGA RIHQTGCNGC
IGMGQAPAIG KNSLRTTPRN FPGRSGTEED AVFLCSPETA AASALTGKIT DPRSLSMSYP
RLREAESIAM TSSLIASPLS FEEARRVTLV KGPNIRSLPT LDPLPDSLDL PILLKMGDNV
STDEIMPAGA KVLPYRSNIE KIATFSFERI DETYVERTRT VPGHAVIAGR NYGQGSSREH
AAVGPRSLGL RLVLAKSFAR IHRQNLINYG VLPLVFVEPK DYDSLEKDDV LAVRDLRRIL
EKGDEVVALE SKGATKGVIL ARHGLTPKQI EIILAGGVTN LRRNASKLPP TEGAGTQRII
EHDALIVH
|
|---|
| |