| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0907 |
|---|
| Symbol | |
|---|
| ID | 6201755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1036702 |
|---|
| End bp | 1038567 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641704904 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001832045 |
|---|
| Protein GI | 182677899 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.144396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.433634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAT TCGCCACGCC TGCGCTCGCC GCAAGGGTCC GTGCTGTCAC AAAGATCGAT
CGCGCAGTGC TTATGACGAC ATCCTTGAAA ACGTCCTTGT GGATGTCCTT AGCGACGGCT
CTGGCCGTTT CCAGTTCCTC TGTCTGGGCA CAATCAGAAG GGACCAAAGA GAAAACGACC
ACGGTGCCGA CCGTCGCCTG TTCCAAAGAG GCGGGCGGCA TCACTTTGCC TCCGGGATTT
TGCGCGACGG TCTTTGCCGA TGGCATTGGC CATGCGCGCC ATCTCGTCGT CGCGCCGAAT
GGCGTCGTCT ATGTCAATAC GTGGAGCGGC CGCTATTATA AAAGCGACAA GACCCCGGAC
GGTGGCTTTC TGGTGGCATT GCAGGATAAG ACTGGAAACG GCAAGGCGGA TGTGGTCAAG
CGTTTCGGCG CAACCGGCAA AGGGATTGCC GGCGGCACCG GCATAGCGAT CTACGGCAAT
GGACTTTTCA TCGAGGAAAG CGATCGGATC GAACGCTATG ACTTGCCGAG CAAAGGGATC
GTGCCGGCGG GAAAACCGGA GATCGTTGTC GAAGGCCTGC CGCTAACCGG CGATCATCCC
ATGCATCCCT TCGTGATCGA TCGCACCGGC AATCTCTTCG TTGATCTGGG CTCGGCCACG
AACGCCTGTC AGACGGAAAA CCGCATGCCG AATGTGGTGG GCGCCGATCC TTGCGTGGAA
CTTGAAACGC GCGGTGGCCT CTGGCGCTAT CATGCCGACA AGCGCGGCCA GAAATTTTCA
CCGAAAGAAC GTTATGCGAC CGGGATCCGC AATGGCGAAG GGCTCGCCTT CGACGCCTCC
GGCCATTTCT ACGCGACGCA GCATGGGCGC GATCAGCTTT CGCAAAATTG GGGGGGGCTC
TATACGACAG AGCAGGGGGT CAACTTGCCC GCCGAGGAAT TGTTGGACGT GCATGAAGGC
TCGGATTTCG GCTGGCCGCA ATGCTATTTC GACGACCTTC AGGGCAAGCT CGTGTTGGCG
CCGGAATATG GTGGCGACGG CGGCAAGAAG ATCGGGGTTT GCGCGCAAAA GTCGGGACCA
GTCGCGGCAT TTCCGGCACA TTGGGCACCG AATGCGCTTG TGATCTATGA AGGCGATCAA
TTGCCTGCCG CCTATAAAGG TGGTGCCTTC ATTGCCTTTC ATGGGTCCTG GAATCGGGCA
CCGGCGCCAC AGGCTGGCTA TAATGTTGTG TTTCAGCCCT TGAAGGATGG CAGGGTTTCA
GGACGTTACG TGGTCTTTGC CGACGGATTT GCCGGCCCGC ATAAGGAGCC CGGACGAGCC
TTGCATCGGC CGAGTGGTCT TGCGGTCGGT CCGGATGGTG CCTTGTTCAT TGGCGATGAC
GCGGGCGGGC GTATCTGGCG GGTGACTTAT CAGGGACCGG ACAAGGACAA AGCGGCGATC
GCCGCTGCTG TCGCTCCGAT CGAGGGAACG ACCACGACAT CGGCCAAGGC CGAACCGCCG
GAGGGGATTG ATCCTGATGC CGGGGTGTCG TTGCCAGTGC CGGAAGGCGC TACGGCCGCA
CAGGTCGCGC GGGGCGACCA GATCTTCCAT GGTGAGATCG CGGGCGGTAC TTGCTCCGGC
TGCCACGGCT CGGATGCCAA GGGGAGTCCT GTCGGGCCGG ATCTGACCAA CGGTCAATGG
CAGTGGAGCG ATGGAAGCTA CGAAGCCTTG CGGCAAGTGA TTGCCAAAGG CGTGACGGAG
CCCAAGCGTT ACCAGGGGGT GATGCCGCCG CGTGGCGGCG CGCCGCTCGC GGATTCCGAT
GTGGCCGCGG TCGCGGCCTA TGTTTGGGCC CTTGCGCAAA AGCCAGCCCC AAAAGCCACC
CAATGA
|
|---|
| Protein sequence | MSVFATPALA ARVRAVTKID RAVLMTTSLK TSLWMSLATA LAVSSSSVWA QSEGTKEKTT
TVPTVACSKE AGGITLPPGF CATVFADGIG HARHLVVAPN GVVYVNTWSG RYYKSDKTPD
GGFLVALQDK TGNGKADVVK RFGATGKGIA GGTGIAIYGN GLFIEESDRI ERYDLPSKGI
VPAGKPEIVV EGLPLTGDHP MHPFVIDRTG NLFVDLGSAT NACQTENRMP NVVGADPCVE
LETRGGLWRY HADKRGQKFS PKERYATGIR NGEGLAFDAS GHFYATQHGR DQLSQNWGGL
YTTEQGVNLP AEELLDVHEG SDFGWPQCYF DDLQGKLVLA PEYGGDGGKK IGVCAQKSGP
VAAFPAHWAP NALVIYEGDQ LPAAYKGGAF IAFHGSWNRA PAPQAGYNVV FQPLKDGRVS
GRYVVFADGF AGPHKEPGRA LHRPSGLAVG PDGALFIGDD AGGRIWRVTY QGPDKDKAAI
AAAVAPIEGT TTTSAKAEPP EGIDPDAGVS LPVPEGATAA QVARGDQIFH GEIAGGTCSG
CHGSDAKGSP VGPDLTNGQW QWSDGSYEAL RQVIAKGVTE PKRYQGVMPP RGGAPLADSD
VAAVAAYVWA LAQKPAPKAT Q
|
|---|
| |