Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0855 |
Symbol | |
ID | 6201547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 973785 |
End bp | 974795 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641704853 |
Product | polyprenyl synthetase |
Protein accession | YP_001831994 |
Protein GI | 182677848 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.215594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGTATTG TGATTCCTCT CGAAGACGCA AAAGAGTCCG GCATCGAAAG GCTCCTTGCC CTGGTGACGC CCGATATGGA GCGCGTCAAT CAGACCATTC TTTCGCGGGC TGCCTCCGAT GTGACGATGA TTCCGGAAGT CGCCAATCAT CTGATTTCCT CGGGCGGCAA GAGGCTGCGT CCCATGCTTA CATTGGCGGC GGCCGGCCTC TGCGGCTATG GCGGCAATGG GCATATCAAG CTCGCGGCCT CGGTCGAATT TATGCATACC GCGACCCTTC TGCATGACGA TGTGGTCGAT GAAAGCGATA TGCGCCGGGG CAAGCTCGCA GCCCGCATGC TCTGGGGCAA TGAAGCCAGT GTCCTCGTTG GCGATTTCCT GCTCGGCCAG GCGTTCAAGA TGATGGTTGA GGTGGGCTCG CTCGCCTGTC TCGAGGTTCT GTCCACGGCG GCAGCGGTAA TCGCTGAGGG CGAGGTCATG CAATTGGCGG CAGCCAAGGA TACTGAGACG GGTGAGGATG ATTATCTCGC CGTCATCCGC GCCAAGACCG CAGCCCTGTT CGGCGCTGCC GCTGAGGTCG GCGCCCTTTT GGCGGAACGG CCAAAGGCGG AAATCGCCGC CTGTCGCAGT TACGGGCTCA ATCTCGGCAT TGCTTTTCAA TTGATCGATG ATGCGCTGGA CTATGGGGGG ACCTCCGCCA AGCTTGGCAA GAATGTCGGC GACGATTTTC GAGAGGGTAA GATCACCTTG CCGGTCGTCC TCTGCTTCCG GCGAGGGACC CAGGACGAGC GCATTTTCTG GCGTCGCACC CTCGAAAAGG GGGAAATTGA GGAAGGCGAT CTCGATATAG CCATCGCTAC AATGCGCAAG CATCGCGCCA TCGAGGATAC GGTGGAACGG GCCCGCCACT ATGGCGCCAT GGCGCGTGAT GCTTTGGAGC TTTTTCCTGC CTCGCCCTGG AAAATCGCCC TGAACGATGT CGTTGATTTC TGTGTCAACC GCATTTCGTA A
|
Protein sequence | MGIVIPLEDA KESGIERLLA LVTPDMERVN QTILSRAASD VTMIPEVANH LISSGGKRLR PMLTLAAAGL CGYGGNGHIK LAASVEFMHT ATLLHDDVVD ESDMRRGKLA ARMLWGNEAS VLVGDFLLGQ AFKMMVEVGS LACLEVLSTA AAVIAEGEVM QLAAAKDTET GEDDYLAVIR AKTAALFGAA AEVGALLAER PKAEIAACRS YGLNLGIAFQ LIDDALDYGG TSAKLGKNVG DDFREGKITL PVVLCFRRGT QDERIFWRRT LEKGEIEEGD LDIAIATMRK HRAIEDTVER ARHYGAMARD ALELFPASPW KIALNDVVDF CVNRIS
|
| |