| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0699 |
|---|
| Symbol | |
|---|
| ID | 6199369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 783553 |
|---|
| End bp | 784728 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641704696 |
|---|
| Product | DNA uptake lipoprotein-like protein |
|---|
| Protein accession | YP_001831838 |
|---|
| Protein GI | 182677692 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.672659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.493581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGG TTTTCCATGT CACATCGAGG CTTTGGAAAG GCGCAGGCCT TGCCAAACGC
GCGTTCCTGC TCTCGGTTTC GCTGCCGCTT GCCGCCTGTT CCTCCATGGG GGATTTCGAC
GCCTCAAAGA GCCTGAACCC GACGAATTGG TTCAAGGGCG AGAAATATGA GGCCAAGGTG
ATCCCTGACG TGCCGGCGGA TGATATCTAT AATCAGGGCC TCGTCCGCCT GCAGAAAAAG
GATTATGAAG CGGCGGGCAA GAAATTCGCC GATCTCGAAA AGCAATATCC CTATTCTCAA
TGGCAGAAGA AGGGATTGCT GATGAGCGCT TATAGCCAAT ATCAAAATGG CAGTTATGAC
GACGCCATTG CGTCGGCGCA GCGCTATTAC ACGCTCTATC CCAATGCGCC GGATACGCCT
TACGCCTATT ATCTCGCGGC CATGTCCAAT TATAACCAGA TCCCGGATGT CAGCCGTGAT
CAGGAGCGCG CCCAGAAGGC GGCGGTGTTG TTTCAACAGA TCGCCGAGAA ATTTCCAAAA
TCGGAATATG GCGAAGACGC CAAATATAAA TTGCAGGTCT GCCGTGACCA GCTGGCCGGC
AAGGAAATGT TCGTCGGCCG TTATTATCTG AACAACCACA ATTATATCGC CGCGGTGAAT
CGTTTCCGCG AAGTGCTGGC CAAATATCAG ACGACCCGCC ATTCGGAAGA AGCCTTGATG
CGCTTGACCG AAGCCTATCT GGCGCTTGGC ATCGTCAATG AGGCGCAGAC GGCGGCGGCG
GTCCTTGGCC ATAACTTCCC GGATTCTCAA TGGTACAAGG ATTCCTATGC CCTGCTGCAG
GACAAAGGCT TGCAGCCGCA GGAGGAAAAA GGCTCCTGGA TCTCCAACAT CTTTCCAAAA
ACTTGGGCGT TGGGGGATCA CGGAAACAAA CCGGCTGAGC CGGAGGTCAA AACGGCTGAG
GCTCCTCCGC CACCGGCGAT CACTCCCGTG CCGACCCGTA CCCCGGCCCG CAGAGGTCCC
GTTACATTGC CGACGGTCGC TCCGCCGGAA ATGCGCGGTC CCGCCGAGAC CAGCAGTGCC
CAGCCGCCCG CAGAAGAAAA TTGGTTCTCG CGCACATTCC ACAAAATGTG GGCCTCGAAT
GACGGTGAAA GCAAGCCGGC GGGGCAAGCG AACTGA
|
|---|
| Protein sequence | MTEVFHVTSR LWKGAGLAKR AFLLSVSLPL AACSSMGDFD ASKSLNPTNW FKGEKYEAKV
IPDVPADDIY NQGLVRLQKK DYEAAGKKFA DLEKQYPYSQ WQKKGLLMSA YSQYQNGSYD
DAIASAQRYY TLYPNAPDTP YAYYLAAMSN YNQIPDVSRD QERAQKAAVL FQQIAEKFPK
SEYGEDAKYK LQVCRDQLAG KEMFVGRYYL NNHNYIAAVN RFREVLAKYQ TTRHSEEALM
RLTEAYLALG IVNEAQTAAA VLGHNFPDSQ WYKDSYALLQ DKGLQPQEEK GSWISNIFPK
TWALGDHGNK PAEPEVKTAE APPPPAITPV PTRTPARRGP VTLPTVAPPE MRGPAETSSA
QPPAEENWFS RTFHKMWASN DGESKPAGQA N
|
|---|
| |