| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0579 |
|---|
| Symbol | |
|---|
| ID | 6198483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 642844 |
|---|
| End bp | 643758 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641704570 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001831720 |
|---|
| Protein GI | 182677574 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.465016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGA TCGATGCCAT GCGTGTGTTC GTGCGGATCG TGGAGCGTGG AAGCTTCGTC
CGTGCCGCCG AGGATCTTGG CCTACCCCCT TCGACCGCGA CCGACGCCGT CAAGCAGCTT
GAAACTCGGC TCGGCGTGCG GTTGCTGCAG CGGACGACAC GGCAGGTCCG CACGACGCTG
GATGGCGAGG CCTATTACCG GCGCTGCCTG GCGATCCTCA ATGATATCGA GGAGGCCGAG
AGCGCTTTCA GCGGCGCCCT CCCGCGCGGC CTGCTGCGCG TCGACGTCCA GGGCACGCAG
GCCCGACGTT TCATCGTACC GGCCTTGCCT CGTTTTTTCG CGGATTATCC GGATCTCGAA
CTGTTCATGA GCGAGGGCGA CCGCTTCGTC GATCTCGTCG GCGAAGGCAT CGATTGCGCG
CTACGCACCG GTGAGCCAAA GGAGAGCGAC ATTATCGCGC GACGCATCGC CATGCTGCCC
GAGGTGACAG TGGCATCAGC CAATTACATA GGCCGTTTCG GACATCCCCA AAGGTGGGAC
GCGTTGGATG GCCATCGGAT GATCGGTTTT CGTTCCTCGG CGACTGGCGG CGTCTTGCCG
CTGGAATTCA TGGTGAACGG CACCCGCAAG ACCGTGACAT TGCCATCGAC TCTCGCGGTC
AATGGCGCCG ATACCTATAA GGCCGCCGCG CAGCAAGGCC TGGGCCTGAT CCAGGTGCCA
CGCTATTCCG TGGAGCAGGA TCTGGCGGAA GGCAGATTGT TGGAATGCCT GCCCGAGACC
CCGCCATCCC CGACGCCAGT CTATGTACTC TACCCGCGCA GTCGCCAACT CAGCCTTCGG
GTCCGGGTGT TCATCGAATG GGTGGCAAAG GAATATGCCA GCCATAGTGG ATCTATAGCG
GCAACCAATG ATTGA
|
|---|
| Protein sequence | MDRIDAMRVF VRIVERGSFV RAAEDLGLPP STATDAVKQL ETRLGVRLLQ RTTRQVRTTL
DGEAYYRRCL AILNDIEEAE SAFSGALPRG LLRVDVQGTQ ARRFIVPALP RFFADYPDLE
LFMSEGDRFV DLVGEGIDCA LRTGEPKESD IIARRIAMLP EVTVASANYI GRFGHPQRWD
ALDGHRMIGF RSSATGGVLP LEFMVNGTRK TVTLPSTLAV NGADTYKAAA QQGLGLIQVP
RYSVEQDLAE GRLLECLPET PPSPTPVYVL YPRSRQLSLR VRVFIEWVAK EYASHSGSIA
ATND
|
|---|
| |