| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0577 |
|---|
| Symbol | |
|---|
| ID | 6199512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 640923 |
|---|
| End bp | 641837 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641704568 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001831718 |
|---|
| Protein GI | 182677572 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.596869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA TAAGTCTTTC GCATATTTTT CTTGTCTGCG CGGATGAGGG GAGTTTCTCG
GCGGCTGGCA GGAAACTGAA CCTTTCTCGC TCGTCGGTCG GCAAAACTGT TGCACGATTG
GAAGACATGC TGGGGGTGCG GCTTTTCCAT CGCTCAACCC GGCATCAGGC CCTCACTGAA
GAGGGAAAAA TCTATTACGA ACATGCCCGG CGAGCACACA ATGAGTTGGA TAGGGCGCGC
CAAATATTCG CGTCCGGTCA CCGTTCGCCG AGCGGAATCC TGCGCGTGAC CGCTCCAATG
AGTTTGGGGC GGTCTTGCAT CGGCCCGCTC CTTCTTGATT TTACGTCGCG ATTTTCCGAC
CTCAAGCTTG TACTCTCTTT GAATGATCGG CCGGTTGATC TCATCGACGA GGGATTTGAT
CTCGCGATCC GCGTTGGAGC CACGATCAAC ACGACAGGGA TAGCGGGGCG AAAGCTCAGT
ACCCAAGCCA TGAGGCTTTA CGCCTCGCCT TCCTACTTAG GGGCAAGGGG AACCCCTAAG
AGCTGCGGGG AATTCGATCA GCATCAAATC CTCGCCTATG GTCGAGGGCG GACTCTGCGC
TGGCGCTTTG CCGGTGTGGG CGGACAAGCG CTCCAAGACG TAGAGGGCAT GAGTCAAGCG
CAATTTGACG ATCTGGATCT GCTGGCGAAT GCGACGGCCC AGGGCTTCGG CATTGCCTCG
CTGCCGACAT GGCTGGCGCA CCCTCGTGCT TTGCGAGGAG AATTGGTGCC TTTAAAGGCG
TTCAATCTGA AGCCGTATGA TATCAGCGCC CTCTGGCCGC AAAGTCATTT CATGCCACCG
AAGGTCCGAT ATGCGATCGA CCATCTGGTT CAGGCCCTGC CTGGCCTTCT GACAGACGAC
TTGAAAGGTC ACTGA
|
|---|
| Protein sequence | MDDISLSHIF LVCADEGSFS AAGRKLNLSR SSVGKTVARL EDMLGVRLFH RSTRHQALTE
EGKIYYEHAR RAHNELDRAR QIFASGHRSP SGILRVTAPM SLGRSCIGPL LLDFTSRFSD
LKLVLSLNDR PVDLIDEGFD LAIRVGATIN TTGIAGRKLS TQAMRLYASP SYLGARGTPK
SCGEFDQHQI LAYGRGRTLR WRFAGVGGQA LQDVEGMSQA QFDDLDLLAN ATAQGFGIAS
LPTWLAHPRA LRGELVPLKA FNLKPYDISA LWPQSHFMPP KVRYAIDHLV QALPGLLTDD
LKGH
|
|---|
| |