Gene Bind_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0556 
Symbol 
ID6200268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp616467 
End bp617711 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID641704547 
Productmajor facilitator transporter 
Protein accessionYP_001831697 
Protein GI182677551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.968297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC TGATCATTCT TTTTTGTACG CGGAGTCTTC GCCTTTTCGC GTTTGGCCTT 
GTTTCTGTCA TCCTCGTCTT CTTTCTCGCA GAACGCGGGT TCACGACGAG TGAGGTGGGA
TGGCTCTTGA GTTTGACCCT CATCGGCGAT GCCGTGATTT CTCTCTTCCT GACGACACGA
GCGGATCGCT GGGGACGACG GCGGACACTC ATGGTTAGTG GCCTTCTCAT GGTCGTCGCA
GGCCTCGCCG TCATCACTAC GGGAAATTTC TGGCTCTTGG CTTTGGCGAT GACGATCGGG
GTGATTAGTC CAGCCGGCAA TGAAGTCGGG CCATTCCTCG CCGTGGAACA GGCCGCCTTG
GCCCATATCG TCACGCCTCA TCAGAGAACG CATTATGTCG CCTGGTATAA CGTCGCTGGT
TTCAGTGCGA CGGCGCTGGG GGCTTTGGTG GGGGGAATTT TGTCCGGCTG GTGGCAAGGA
AAGGGTGTGC CCGCTCTCTC GAGCTACACA TATCTGTTTG GGGTTTACGC CGGCGTGGGG
TTGCTCCTCG TCATTCTTTC CATGCGCTTG AGTGATGCTG TCGAGGTCGA ACATAACCCG
GTCAAGAACC GTGGCCTGAT CGCCAATTGG ACGGGATTAC ATGAATCGCG TTCGATCGTG
CTTCGCCTGA GTGCTCTCTT CGCTCTCGAT GCCTTTGCCG GCGGCTTTAT CGTGCAAAGC
ATTCTAGCCT ATTGGTTTTA CTTGAAATTT GGTGCGACGA ACACCGAGCT GGGCGGCCTG
TTTTTCGCGA CCAATATTTT ATCCGGTATT TCGGCCCTGG TGGCGGTGCC TTTGGCCAGG
CGTCTGGGGC TCGTCAACAC AATGGTGTTC ACACACCTCC CATCGAACCT GCTTTTGATG
GCCGTCCCCC TCATGCCGAA TTTCCAGCTC GCCGTGGGGC TTCTCTTGCT GCGCCATCTG
ATCTCGCAGA TGGATGTTCC TGCAAGGCAA TCCTATGTGA TGGCGGTGGT CGCGCCTTCC
GAATATTCAG CGGCGAACGG CATTACCGCG ACAGTCCGTT CCCTTGGCTC CGGGCTGGCG
CCCTCCCTGG CCGGTGGTTT GCTGAGCGTT GCTCCCCTTG TCAACGCGCC TATTTTTTTA
GCTGGCGGAT TGAAGATTGT ATACGATCTG GCGCTGTATC GTGGATTCAG CCATATCAAG
CCGCCTGAAG AAATTGATGC CAAAACGGGC TCCCGGCCAC GTTGA
 
Protein sequence
MRDLIILFCT RSLRLFAFGL VSVILVFFLA ERGFTTSEVG WLLSLTLIGD AVISLFLTTR 
ADRWGRRRTL MVSGLLMVVA GLAVITTGNF WLLALAMTIG VISPAGNEVG PFLAVEQAAL
AHIVTPHQRT HYVAWYNVAG FSATALGALV GGILSGWWQG KGVPALSSYT YLFGVYAGVG
LLLVILSMRL SDAVEVEHNP VKNRGLIANW TGLHESRSIV LRLSALFALD AFAGGFIVQS
ILAYWFYLKF GATNTELGGL FFATNILSGI SALVAVPLAR RLGLVNTMVF THLPSNLLLM
AVPLMPNFQL AVGLLLLRHL ISQMDVPARQ SYVMAVVAPS EYSAANGITA TVRSLGSGLA
PSLAGGLLSV APLVNAPIFL AGGLKIVYDL ALYRGFSHIK PPEEIDAKTG SRPR