Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0556 |
Symbol | |
ID | 6200268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 616467 |
End bp | 617711 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641704547 |
Product | major facilitator transporter |
Protein accession | YP_001831697 |
Protein GI | 182677551 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.968297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATC TGATCATTCT TTTTTGTACG CGGAGTCTTC GCCTTTTCGC GTTTGGCCTT GTTTCTGTCA TCCTCGTCTT CTTTCTCGCA GAACGCGGGT TCACGACGAG TGAGGTGGGA TGGCTCTTGA GTTTGACCCT CATCGGCGAT GCCGTGATTT CTCTCTTCCT GACGACACGA GCGGATCGCT GGGGACGACG GCGGACACTC ATGGTTAGTG GCCTTCTCAT GGTCGTCGCA GGCCTCGCCG TCATCACTAC GGGAAATTTC TGGCTCTTGG CTTTGGCGAT GACGATCGGG GTGATTAGTC CAGCCGGCAA TGAAGTCGGG CCATTCCTCG CCGTGGAACA GGCCGCCTTG GCCCATATCG TCACGCCTCA TCAGAGAACG CATTATGTCG CCTGGTATAA CGTCGCTGGT TTCAGTGCGA CGGCGCTGGG GGCTTTGGTG GGGGGAATTT TGTCCGGCTG GTGGCAAGGA AAGGGTGTGC CCGCTCTCTC GAGCTACACA TATCTGTTTG GGGTTTACGC CGGCGTGGGG TTGCTCCTCG TCATTCTTTC CATGCGCTTG AGTGATGCTG TCGAGGTCGA ACATAACCCG GTCAAGAACC GTGGCCTGAT CGCCAATTGG ACGGGATTAC ATGAATCGCG TTCGATCGTG CTTCGCCTGA GTGCTCTCTT CGCTCTCGAT GCCTTTGCCG GCGGCTTTAT CGTGCAAAGC ATTCTAGCCT ATTGGTTTTA CTTGAAATTT GGTGCGACGA ACACCGAGCT GGGCGGCCTG TTTTTCGCGA CCAATATTTT ATCCGGTATT TCGGCCCTGG TGGCGGTGCC TTTGGCCAGG CGTCTGGGGC TCGTCAACAC AATGGTGTTC ACACACCTCC CATCGAACCT GCTTTTGATG GCCGTCCCCC TCATGCCGAA TTTCCAGCTC GCCGTGGGGC TTCTCTTGCT GCGCCATCTG ATCTCGCAGA TGGATGTTCC TGCAAGGCAA TCCTATGTGA TGGCGGTGGT CGCGCCTTCC GAATATTCAG CGGCGAACGG CATTACCGCG ACAGTCCGTT CCCTTGGCTC CGGGCTGGCG CCCTCCCTGG CCGGTGGTTT GCTGAGCGTT GCTCCCCTTG TCAACGCGCC TATTTTTTTA GCTGGCGGAT TGAAGATTGT ATACGATCTG GCGCTGTATC GTGGATTCAG CCATATCAAG CCGCCTGAAG AAATTGATGC CAAAACGGGC TCCCGGCCAC GTTGA
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Protein sequence | MRDLIILFCT RSLRLFAFGL VSVILVFFLA ERGFTTSEVG WLLSLTLIGD AVISLFLTTR ADRWGRRRTL MVSGLLMVVA GLAVITTGNF WLLALAMTIG VISPAGNEVG PFLAVEQAAL AHIVTPHQRT HYVAWYNVAG FSATALGALV GGILSGWWQG KGVPALSSYT YLFGVYAGVG LLLVILSMRL SDAVEVEHNP VKNRGLIANW TGLHESRSIV LRLSALFALD AFAGGFIVQS ILAYWFYLKF GATNTELGGL FFATNILSGI SALVAVPLAR RLGLVNTMVF THLPSNLLLM AVPLMPNFQL AVGLLLLRHL ISQMDVPARQ SYVMAVVAPS EYSAANGITA TVRSLGSGLA PSLAGGLLSV APLVNAPIFL AGGLKIVYDL ALYRGFSHIK PPEEIDAKTG SRPR
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