| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0541 |
|---|
| Symbol | |
|---|
| ID | 6198550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 596524 |
|---|
| End bp | 598029 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641704532 |
|---|
| Product | carboxypeptidase Taq |
|---|
| Protein accession | YP_001831682 |
|---|
| Protein GI | 182677536 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCT ACCACGCGCT TGAGCAGCAA TTTGCTCGCA TAGACAAGAT CAAAGACGTG
ATCGGGCTCC TCAACTGGGA TACCGAAACG ATCATGCCTG ATGGAGCGGC CGAGGGTCGT
TCGGAGCAAT TGTCCACGTT GGAAGGAATG GCGCACAGGC TTCTTGTCTC CGCCGAGACC
GGAGAGCTTC TGGATAAAGC CGAGGCGGCA GCGGACGGAC TCGATGATTG GCAAAGCGCC
AATCTTCGCG AGATGCGGCG CCTCTATTTC CATGCAGCCG CCATTCCGGA AGAGCTTGTC
GAGGCAAACT CCAAGGCCGT TTCCCGATCG CTCATGGCCT GGAGGCAAGC GCGCAAGAAC
AGCGATTTCG CCGCCCTCCT GCCCTATCTG AAGGAGGTGC TCGACCTGCA ACGCAGGATC
GGTCAGATCA AAGGCGAAGC GCTCGGGCTC TCACCTTACG ATGCCCTCCT CGATACCTAC
GAGCCAGGGA TGCGTCAGGC GAAAATCGAC CTGCTCTTTA CCAATCTGAG GGCTGAGCTC
CCCAGCCTGA TCCAAGAGGC GCAGGCTCGC CAGGCGAGCT TGCCTCCCAC CGAAGCTCTG
ACTGGTCCCT TCCCCATCGA CCTCCAACGA GGCCTTGGCA AGAAGCTCAT GGCAGCGGTT
GGATTTGATT TTGAGCGCGG TCGCCTCGAT ATCAGCCTGC ATCCGTTCTG CGGCGGCGCG
ACGGATGATG TACGGATCAC AAGCCGCTAC GATGAGGAGC GGTTCATCAG CGGCCTCATG
GGCGTGTTGC ACGAGACAGG CCATGCTCTT TATGAGCAAG GGCGGCCGGA GGCTTGGCGG
CATCAGCCGG TGGGGGCTGC CCGGGGCATG GCTCTCCACG AAAGCCAGTC GCTTTTGATC
GAAATGCAAG CCTGCCGTTC ACGCGCCTTT GTGCATTATC TGGCGCCCCT CTTGCGTGAA
ACCTTCCAGG GTGACGGTGC GGCATGGAGT GCGGACAATC TCTACCGCGA TCTGACAACC
GTCAAACCTG GGTTCATCCG GGTCGATGCG GATGAGGTCA CCTATCCAGC GCATGTCCTT
TTGCGATACG ATCTGGAAAA GGCCATGATC AATGGGGATC TGCGCCTCGA GGACCTGCCA
GGGGCTTTCA ATGAGGGCAT GAAGACGCTC CTTGGACTAA CAGTGCCGAA TGATGGTTTG
GGGTGTCTCC AGGATATCCA CTGGCCGGGC GGAAGCTGGG GCTATTTTCC GACCTATACG
CTTGGGGCCA TGGCGGCTGC GCAGCTCTTC GATGCCGCCA GCCGCGCGGA GCCTGATGTG
CTGCCAGGGA TTGGCCGTGG CGACTTTGGA CCGCTGCGGT CCTGGTTGTC AGCCCATGTC
CATAGGAAGG GCAGTTTGCT GGAAATGGAT GAGCTGCTGA TCGCCGCAAC GGGTCGGCCC
TTAGGAGCGG AAGCGTTCCA GAAACATCTT CGAACCCGCT ACCTTGAGGA TCGGCATCAA
GCTTAG
|
|---|
| Protein sequence | MTSYHALEQQ FARIDKIKDV IGLLNWDTET IMPDGAAEGR SEQLSTLEGM AHRLLVSAET
GELLDKAEAA ADGLDDWQSA NLREMRRLYF HAAAIPEELV EANSKAVSRS LMAWRQARKN
SDFAALLPYL KEVLDLQRRI GQIKGEALGL SPYDALLDTY EPGMRQAKID LLFTNLRAEL
PSLIQEAQAR QASLPPTEAL TGPFPIDLQR GLGKKLMAAV GFDFERGRLD ISLHPFCGGA
TDDVRITSRY DEERFISGLM GVLHETGHAL YEQGRPEAWR HQPVGAARGM ALHESQSLLI
EMQACRSRAF VHYLAPLLRE TFQGDGAAWS ADNLYRDLTT VKPGFIRVDA DEVTYPAHVL
LRYDLEKAMI NGDLRLEDLP GAFNEGMKTL LGLTVPNDGL GCLQDIHWPG GSWGYFPTYT
LGAMAAAQLF DAASRAEPDV LPGIGRGDFG PLRSWLSAHV HRKGSLLEMD ELLIAATGRP
LGAEAFQKHL RTRYLEDRHQ A
|
|---|
| |