Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0498 |
Symbol | truA |
ID | 6198728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 555948 |
End bp | 556730 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641704490 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001831640 |
Protein GI | 182677494 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.276937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCT ATAAATTAAC TGTCGAATAT GACGGCGCGT CCTTTGTGGG TTGGCAGAGG CAGAAGAATG GGCTCTCGGT TCAGGAAGTG ATCGAGACGG CTCTCTTGGC CATCAATGGC GCGCCGGTTG GCATTCGCGG AGCGGGCCGC ACGGATGCCG GCGTTCATGC GAGTGCTCAA GTGGCCCATG CCGATCTTGC GCGGGAATGG CGTCCCGATG TCCTGCGCGA TGCCTTGAAC GCGCATATGC GTCCGGCTTT GGTCGCTGTC GTGGCGGCGG AACCTGTCCC GGAAACGTTC GACGCGCGCT TTTCAGCCAT CCGCCGGCAT TATCTCTACC GTATCATCAA TCGCCGTGCG CCTCTGACCT TTGAGGCGGG GCGCGCCTGG CTGGTTAAAC GCCGGCTCGA TGCGCGAGCC ATGCATGAAG CGGCGCAAGT CCTGACCGGA CGCCATGATT TTTCGACCTT TCGGGCGGCG GAATGCCAGG CGGCGAGCCC AATCCGCACG CTGGAGCGTT TGGACGTGCA AGCCGTGGGC GATCTCATCG AAATCCGGGC GAGCGCGCGA TCCTTCCTGC ATCATCAGGT GCGCTCGATG GTGGGGTCGC TCGAAATGGT CGGTTCCGGC AAATGGAGCG CAGGGGATCT GCGGGCGGCT CTGGAGGCCT GTGATCGGCG CCGTTGTGGC ATGGTCGCTC CGGCCGCCGG CCTTTATCTG ACCGGGGTCG ATTATCCTGA AGAAGGAGAA GAAAAAGGGG CTCAGCCCTT TTTCGGCGAA TAG
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Protein sequence | MPRYKLTVEY DGASFVGWQR QKNGLSVQEV IETALLAING APVGIRGAGR TDAGVHASAQ VAHADLAREW RPDVLRDALN AHMRPALVAV VAAEPVPETF DARFSAIRRH YLYRIINRRA PLTFEAGRAW LVKRRLDARA MHEAAQVLTG RHDFSTFRAA ECQAASPIRT LERLDVQAVG DLIEIRASAR SFLHHQVRSM VGSLEMVGSG KWSAGDLRAA LEACDRRRCG MVAPAAGLYL TGVDYPEEGE EKGAQPFFGE
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