Gene Bind_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0498 
SymboltruA 
ID6198728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp555948 
End bp556730 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID641704490 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_001831640 
Protein GI182677494 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.276937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCT ATAAATTAAC TGTCGAATAT GACGGCGCGT CCTTTGTGGG TTGGCAGAGG 
CAGAAGAATG GGCTCTCGGT TCAGGAAGTG ATCGAGACGG CTCTCTTGGC CATCAATGGC
GCGCCGGTTG GCATTCGCGG AGCGGGCCGC ACGGATGCCG GCGTTCATGC GAGTGCTCAA
GTGGCCCATG CCGATCTTGC GCGGGAATGG CGTCCCGATG TCCTGCGCGA TGCCTTGAAC
GCGCATATGC GTCCGGCTTT GGTCGCTGTC GTGGCGGCGG AACCTGTCCC GGAAACGTTC
GACGCGCGCT TTTCAGCCAT CCGCCGGCAT TATCTCTACC GTATCATCAA TCGCCGTGCG
CCTCTGACCT TTGAGGCGGG GCGCGCCTGG CTGGTTAAAC GCCGGCTCGA TGCGCGAGCC
ATGCATGAAG CGGCGCAAGT CCTGACCGGA CGCCATGATT TTTCGACCTT TCGGGCGGCG
GAATGCCAGG CGGCGAGCCC AATCCGCACG CTGGAGCGTT TGGACGTGCA AGCCGTGGGC
GATCTCATCG AAATCCGGGC GAGCGCGCGA TCCTTCCTGC ATCATCAGGT GCGCTCGATG
GTGGGGTCGC TCGAAATGGT CGGTTCCGGC AAATGGAGCG CAGGGGATCT GCGGGCGGCT
CTGGAGGCCT GTGATCGGCG CCGTTGTGGC ATGGTCGCTC CGGCCGCCGG CCTTTATCTG
ACCGGGGTCG ATTATCCTGA AGAAGGAGAA GAAAAAGGGG CTCAGCCCTT TTTCGGCGAA
TAG
 
Protein sequence
MPRYKLTVEY DGASFVGWQR QKNGLSVQEV IETALLAING APVGIRGAGR TDAGVHASAQ 
VAHADLAREW RPDVLRDALN AHMRPALVAV VAAEPVPETF DARFSAIRRH YLYRIINRRA
PLTFEAGRAW LVKRRLDARA MHEAAQVLTG RHDFSTFRAA ECQAASPIRT LERLDVQAVG
DLIEIRASAR SFLHHQVRSM VGSLEMVGSG KWSAGDLRAA LEACDRRRCG MVAPAAGLYL
TGVDYPEEGE EKGAQPFFGE