| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0461 |
|---|
| Symbol | |
|---|
| ID | 6198976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 522152 |
|---|
| End bp | 522874 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641704453 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_001831603 |
|---|
| Protein GI | 182677457 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.396268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGCAA CGAGTTTGCT CGCCCGCACA AAGATAGTAC AAGCGGCCCC CTCGCCCATC
CGTGCTATCG CATTTGATGG ATTTCCCATT TTCGACCCGC GCAGCGTCCC AATGCTCGCG
CGCGATATGC TCGGCGAGCG AGGCGAATTG CTTGCAGCGC AATGGTCGAA CAAGATTTTT
AGCTATAGCT GGCTTCTAAC GGCAGCGGGA CACTACCAAG ATTTCAGAAC ATTGGCGGAT
ACCACTCTAT CCTACACAGC TCATGCAATG GATCTCACAC TGGATGACAA TACGCGCCAA
AGACTCATCA ACCAGTATGA ATCATTAGAC ATATGGCCGG ATGTAAAGCC AGCGCTTGAA
CGATTGCGCA CGGCCAATAT CAGACTCGCA TTCCTGTCCA ATCTCGGCGC CACGACATTG
ATGGCCAATA TGAACCGCAA TGGCATCGCA AGCTATTTTG AGGCCCCAAT CAGCACCGAT
CGCGTGAAAC GTTTCAAGCC GGCTCCTGAA GCCTATAAAA TGGCGGTCGA TGCCTTTGGC
CTGCCACGTG AGCAGATCGG TTTCGCTGCT TTTGGCGGTT GGGACGCGAT TGGGGCAACC
TGGTTCGGTT ACCGAACGGC GTGGGTGAAT AGATTAGGCC TGCCCGCTGA ACCGTTCGAC
ATACGTCCTG AGATTACGAG CCGTGGGATG GAAGGCGTTC TTACCCTTGC GGGGCTTACT
TGA
|
|---|
| Protein sequence | MGATSLLART KIVQAAPSPI RAIAFDGFPI FDPRSVPMLA RDMLGERGEL LAAQWSNKIF
SYSWLLTAAG HYQDFRTLAD TTLSYTAHAM DLTLDDNTRQ RLINQYESLD IWPDVKPALE
RLRTANIRLA FLSNLGATTL MANMNRNGIA SYFEAPISTD RVKRFKPAPE AYKMAVDAFG
LPREQIGFAA FGGWDAIGAT WFGYRTAWVN RLGLPAEPFD IRPEITSRGM EGVLTLAGLT
|
|---|
| |