Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0454 |
Symbol | |
ID | 6198719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 510452 |
End bp | 512272 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641704446 |
Product | GTP-binding protein TypA |
Protein accession | YP_001831596 |
Protein GI | 182677450 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0387032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGC GGAATATCGC CATCATCGCC CACGTCGACC ACGGCAAGAC GACCCTGGTG GATCGCCTCC TGCAACAATC CGGCGCGTTC CGCGAAAACC AGCGCGTCGC CGAACGGGTC ATGGACTCGA ACGACCTCGA AAAGGAACGC GGCATCACGA TCATGGCCAA GGCGACCTCG ATCGCCTGGA AGGATACGCG GATCAATATC GTCGACACGC CCGGCCACGC CGATTTCGGC GGCGAAGTGG AGCGCATTCT CTCCATGGTC GATGGCGCCA TCGTTCTCGT CGATGCGGCC GAAGGACCGA TGCCACAGAC CAAATTCGTG GTCGGCAAGG CGCTGAAGAT CGGCCTCAAG CCGATCGTCG CCGTCAATAA GGTCGATAAG CCTGATGCGC GCATCACCGA AGTGGTGAAC GAAGTTTTCG ACCTCTTCGC CGCGCTCGAC GCTACCGACG AACAGCTCGA TTTCCCGATC CTCTACGGCT CCGCCAAACA AGGCTGGATG GCTGAGAGCC CGGAAGGCCC GAAGGACGGT ATGGGTCCCC TCTTTGATCT CGTCCTCAAG CATGTGCCGG CGCCGACGAT CGGCGAAGGC GGTTTCCGTA TGCTCGGCAC CTTGCTTGAA TCCAATCCCT ATCTCGGCCG TCTCATTACC GGCCGCATCT TCTCCGGTTC GGTCAAGCCG AACCAGGCAG TGAAGGTTCT CGACCGCAAT GGCAATGTGG TGGAACAGGG CCGCGTCTCC AAAATCCTCG CCTTCCGCGG CATTGAGCGG GCACCGATCG AGGAAGCCGA AGCCGGCGAT ATCGTCGCCA TAGCGGGCCT CGAGAAATTC AACGTCGCCG ATACCCTGTG CGCGCCGGAG ATCAGCGAGC CCTTGCAGGC ACAGCCGATC GATCCCCCGA CGCTGTCCAT GACCTTCCTC GTCAATGATT CACCGCTTGC CGGCACCGAA GGCGACAAGG TAACGAGCCG CATGATCCGC GCGCGGCTCA TGAAGGAGGC CGAAGGCAAT GTCGCCCTGA AGGTCGAGGA TTCGCCCGGC GGTGAATCCT TCATCGTCTC GGGACGCGGC GAATTGCAGC TCGCGATCCT CATCGAGACC ATGCGCCGCG AAGGGTTCGA GCTCGGTGTG TCACGGCCGA AAGTGGTCTA TCAGCGGGGC GAGGACGAGA AGCAATTGCT CGAGCCGATC GAGGAAGTCG TCATCGACGT CGATGAGGAA CATTCCGGCG TCGTCGTGCA GAAAATGGCC GAACGCAAGG CCGATATGAT CGAGATGCGC CCCTCGGGCG GCGATCGCCT GCGCCTCGTG TTCCATGCCC CGACGCGCGG ACTCATCGGC TATCAGGGCG AGCTTTTGAC CGATACGCGC GGCACCGCCA TCATGAACCG CCTGTTCCAC TCCTACCTTC CCTGGAAGGG CGAGATCACC GGCCGCCGCA ACGGCGTTCT GATTTCCAAC GATAATGGCG AATCCGTCGC CTATGCGATG TGGAAGCTCG AAGACCGTGG CCCGATGATG ATCGACCCCG GCCAGAAGGT CTATCGCGGC ATGATCGTTG GCGAACACAC ACGCGACAAC GACCTTGAAA TCAACGTGCT GAAAGGCAAG CAGCTCACCA ACATCCGCGC CGCCGGCAAG GATGAAGCCG TGAAGCTGAC ACCGCCCATT CGCATGACGC TCGAGCGGGC ACTCGCCTAT ATCGAGGAAG ATGAACTCGT CGAAGTCACG CCGAAATCGA TCCGTCTGCG CAAAACCTTG CTCGATCCGA ACGACCGGAA GCGCGCCAGC CGCACCAAGG AAAGCGCTTG A
|
Protein sequence | MNLRNIAIIA HVDHGKTTLV DRLLQQSGAF RENQRVAERV MDSNDLEKER GITIMAKATS IAWKDTRINI VDTPGHADFG GEVERILSMV DGAIVLVDAA EGPMPQTKFV VGKALKIGLK PIVAVNKVDK PDARITEVVN EVFDLFAALD ATDEQLDFPI LYGSAKQGWM AESPEGPKDG MGPLFDLVLK HVPAPTIGEG GFRMLGTLLE SNPYLGRLIT GRIFSGSVKP NQAVKVLDRN GNVVEQGRVS KILAFRGIER APIEEAEAGD IVAIAGLEKF NVADTLCAPE ISEPLQAQPI DPPTLSMTFL VNDSPLAGTE GDKVTSRMIR ARLMKEAEGN VALKVEDSPG GESFIVSGRG ELQLAILIET MRREGFELGV SRPKVVYQRG EDEKQLLEPI EEVVIDVDEE HSGVVVQKMA ERKADMIEMR PSGGDRLRLV FHAPTRGLIG YQGELLTDTR GTAIMNRLFH SYLPWKGEIT GRRNGVLISN DNGESVAYAM WKLEDRGPMM IDPGQKVYRG MIVGEHTRDN DLEINVLKGK QLTNIRAAGK DEAVKLTPPI RMTLERALAY IEEDELVEVT PKSIRLRKTL LDPNDRKRAS RTKESA
|
| |