Gene Bind_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0454 
Symbol 
ID6198719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp510452 
End bp512272 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content61% 
IMG OID641704446 
ProductGTP-binding protein TypA 
Protein accessionYP_001831596 
Protein GI182677450 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0387032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GGAATATCGC CATCATCGCC CACGTCGACC ACGGCAAGAC GACCCTGGTG 
GATCGCCTCC TGCAACAATC CGGCGCGTTC CGCGAAAACC AGCGCGTCGC CGAACGGGTC
ATGGACTCGA ACGACCTCGA AAAGGAACGC GGCATCACGA TCATGGCCAA GGCGACCTCG
ATCGCCTGGA AGGATACGCG GATCAATATC GTCGACACGC CCGGCCACGC CGATTTCGGC
GGCGAAGTGG AGCGCATTCT CTCCATGGTC GATGGCGCCA TCGTTCTCGT CGATGCGGCC
GAAGGACCGA TGCCACAGAC CAAATTCGTG GTCGGCAAGG CGCTGAAGAT CGGCCTCAAG
CCGATCGTCG CCGTCAATAA GGTCGATAAG CCTGATGCGC GCATCACCGA AGTGGTGAAC
GAAGTTTTCG ACCTCTTCGC CGCGCTCGAC GCTACCGACG AACAGCTCGA TTTCCCGATC
CTCTACGGCT CCGCCAAACA AGGCTGGATG GCTGAGAGCC CGGAAGGCCC GAAGGACGGT
ATGGGTCCCC TCTTTGATCT CGTCCTCAAG CATGTGCCGG CGCCGACGAT CGGCGAAGGC
GGTTTCCGTA TGCTCGGCAC CTTGCTTGAA TCCAATCCCT ATCTCGGCCG TCTCATTACC
GGCCGCATCT TCTCCGGTTC GGTCAAGCCG AACCAGGCAG TGAAGGTTCT CGACCGCAAT
GGCAATGTGG TGGAACAGGG CCGCGTCTCC AAAATCCTCG CCTTCCGCGG CATTGAGCGG
GCACCGATCG AGGAAGCCGA AGCCGGCGAT ATCGTCGCCA TAGCGGGCCT CGAGAAATTC
AACGTCGCCG ATACCCTGTG CGCGCCGGAG ATCAGCGAGC CCTTGCAGGC ACAGCCGATC
GATCCCCCGA CGCTGTCCAT GACCTTCCTC GTCAATGATT CACCGCTTGC CGGCACCGAA
GGCGACAAGG TAACGAGCCG CATGATCCGC GCGCGGCTCA TGAAGGAGGC CGAAGGCAAT
GTCGCCCTGA AGGTCGAGGA TTCGCCCGGC GGTGAATCCT TCATCGTCTC GGGACGCGGC
GAATTGCAGC TCGCGATCCT CATCGAGACC ATGCGCCGCG AAGGGTTCGA GCTCGGTGTG
TCACGGCCGA AAGTGGTCTA TCAGCGGGGC GAGGACGAGA AGCAATTGCT CGAGCCGATC
GAGGAAGTCG TCATCGACGT CGATGAGGAA CATTCCGGCG TCGTCGTGCA GAAAATGGCC
GAACGCAAGG CCGATATGAT CGAGATGCGC CCCTCGGGCG GCGATCGCCT GCGCCTCGTG
TTCCATGCCC CGACGCGCGG ACTCATCGGC TATCAGGGCG AGCTTTTGAC CGATACGCGC
GGCACCGCCA TCATGAACCG CCTGTTCCAC TCCTACCTTC CCTGGAAGGG CGAGATCACC
GGCCGCCGCA ACGGCGTTCT GATTTCCAAC GATAATGGCG AATCCGTCGC CTATGCGATG
TGGAAGCTCG AAGACCGTGG CCCGATGATG ATCGACCCCG GCCAGAAGGT CTATCGCGGC
ATGATCGTTG GCGAACACAC ACGCGACAAC GACCTTGAAA TCAACGTGCT GAAAGGCAAG
CAGCTCACCA ACATCCGCGC CGCCGGCAAG GATGAAGCCG TGAAGCTGAC ACCGCCCATT
CGCATGACGC TCGAGCGGGC ACTCGCCTAT ATCGAGGAAG ATGAACTCGT CGAAGTCACG
CCGAAATCGA TCCGTCTGCG CAAAACCTTG CTCGATCCGA ACGACCGGAA GCGCGCCAGC
CGCACCAAGG AAAGCGCTTG A
 
Protein sequence
MNLRNIAIIA HVDHGKTTLV DRLLQQSGAF RENQRVAERV MDSNDLEKER GITIMAKATS 
IAWKDTRINI VDTPGHADFG GEVERILSMV DGAIVLVDAA EGPMPQTKFV VGKALKIGLK
PIVAVNKVDK PDARITEVVN EVFDLFAALD ATDEQLDFPI LYGSAKQGWM AESPEGPKDG
MGPLFDLVLK HVPAPTIGEG GFRMLGTLLE SNPYLGRLIT GRIFSGSVKP NQAVKVLDRN
GNVVEQGRVS KILAFRGIER APIEEAEAGD IVAIAGLEKF NVADTLCAPE ISEPLQAQPI
DPPTLSMTFL VNDSPLAGTE GDKVTSRMIR ARLMKEAEGN VALKVEDSPG GESFIVSGRG
ELQLAILIET MRREGFELGV SRPKVVYQRG EDEKQLLEPI EEVVIDVDEE HSGVVVQKMA
ERKADMIEMR PSGGDRLRLV FHAPTRGLIG YQGELLTDTR GTAIMNRLFH SYLPWKGEIT
GRRNGVLISN DNGESVAYAM WKLEDRGPMM IDPGQKVYRG MIVGEHTRDN DLEINVLKGK
QLTNIRAAGK DEAVKLTPPI RMTLERALAY IEEDELVEVT PKSIRLRKTL LDPNDRKRAS
RTKESA