| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0424 |
|---|
| Symbol | |
|---|
| ID | 6198425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 478979 |
|---|
| End bp | 479689 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641704416 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_001831566 |
|---|
| Protein GI | 182677420 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.249419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCC TGCCTTTCTC TCGGCTCTTC TCCATCCGCT CGGGCCGTTT CGCTCGCTTC
GTGTTCGGTG TCCTGCTGAC GCTCGGCCTC GTGCTCGGCA GCCTGCTCGT CGCTTATCGC
TTTCTGGCAC CGGTCTCGAC CTTGATGGCG TGGCACGAGA TTAAAGGGGA CGAAGTGGAT
CGCCACTACC AGCCCCTCGC ACGCATCGCG CCGATTCTGG CCGCTTCCGT CATCGCTTCG
GAAGATGCGC GCTTTTGCCA GCATCACGGG GTCGACTGGC AGTCTCTCTC GGAGGTGATG
GACAAGGCCA AGGCCCGGGC AGACGGGCCC TCGCGCGGTG CCTCGACGAT CACTATGCAG
ACCGCCAAGA ACCTCTTCCT CTGGCCTTCG CGTTCCGTCC TGCGCAAAAC ATTGGAAATT
CCGCTGGCCT TGCTCATCGA CGCGGTATGG CCGAAGCGGC GCATTCTGGA AATCTATTTG
AATATCGCCG AATGGGGCGA TGGTCTCTTT GGTGCGGAGG CGGCGGCCCG GCATTATTTC
GGCAAAAGCG CCGATGCACT TGACCGGCGC GAGGCTGCGC TGCTTGCCAC CGCCTTGCCC
AATCCGATGC GGCGAAATCC CGCCTCTCCG ACGCGGCTGC ATCGCCTGCT CGCGGCGCGA
ATCGCCGCCC GCGCGGGCGC CATGGGCGCG GATATTACCT GTCTGAAATG A
|
|---|
| Protein sequence | MAFLPFSRLF SIRSGRFARF VFGVLLTLGL VLGSLLVAYR FLAPVSTLMA WHEIKGDEVD
RHYQPLARIA PILAASVIAS EDARFCQHHG VDWQSLSEVM DKAKARADGP SRGASTITMQ
TAKNLFLWPS RSVLRKTLEI PLALLIDAVW PKRRILEIYL NIAEWGDGLF GAEAAARHYF
GKSADALDRR EAALLATALP NPMRRNPASP TRLHRLLAAR IAARAGAMGA DITCLK
|
|---|
| |