Gene Bind_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0423 
Symbol 
ID6199285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp477978 
End bp478910 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID641704415 
Productpolyprenyl synthetase 
Protein accessionYP_001831565 
Protein GI182677419 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.175484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG GCACCCTGGC GGAAGATTTT CAACAGCGGC TCACGCAAAT CGCCGAGGCG 
ACGGAGAAAA CCCTCGACCA TTTGCTCGGT CCCTCCCCCC TGCCCGGCGA AACCTTGCGT
CCGCCGCGTT TCCTCGAAGC CATGCGCTAT GCTTCTCTCG GTGGCGGCAA AAGGCTGCGC
CCCTTCCTGC TCGTTGAGAC AGCGCGGCTG TTCGGCATCG AAGGAGAGGG CGTCCTGCGC
GCCGCCTCGG CACTCGAAAT GATCCATTGC TATTCGCTCG TGCATGATGA TCTGCCGGCG
CTCGACAATG ATGATTTGCG CCGCGGCCGG CCGACGACTC ACAAGGCCTA TGACGAAGCG
ACCGCCATTC TCGTCGGCGA CGGCCTTTTG ACCTATGCTT TCGACGTCCT GGCGGACCCT
GCCACCCATA AGGATCCGGC GATTCGCATC GAACTCGTCC TGGCGCTCGC CCGGGCCGCT
GGCGTTGGCG GCATGGTCGG CGGACAAGTG CTCGATATCG AAGCCGAACA GGCCAAGACC
CCGCATACCG CCGAGGCGGT GATCGAACTG CAATCGATGA AGACCGGCGC CCTTTTGCAT
TATGCGGTCA TCGCCGGGGC GATTTTCGCC GGAGTCTCCA AGCAGACGCG CGAGGCGCTC
TCGGCCTATG GTCAGGCACT CGGCGCGGCC TTCCAGGTGG CCGATGATAT TCTCGATGTC
GAGGCCGATA CAGAAGCGCT CGGCAAAAAG GCTGGCAAGG ATGCCGATCG CAACAAGGCG
ACCCTGGTCG CCTCGCTCGG CCTTGAAGCG GCTCGCAAAC GCCGCGACAC ATTATCCGCC
GAGGCGATCG CCGCCCTCGA TTCCTTTCCA GAAGGCCGCG AAGCGCATAT TCTCAAGGAA
GCGGCCCGTT TCGCGGCAAC CCGAAAGAAT TGA
 
Protein sequence
MTGGTLAEDF QQRLTQIAEA TEKTLDHLLG PSPLPGETLR PPRFLEAMRY ASLGGGKRLR 
PFLLVETARL FGIEGEGVLR AASALEMIHC YSLVHDDLPA LDNDDLRRGR PTTHKAYDEA
TAILVGDGLL TYAFDVLADP ATHKDPAIRI ELVLALARAA GVGGMVGGQV LDIEAEQAKT
PHTAEAVIEL QSMKTGALLH YAVIAGAIFA GVSKQTREAL SAYGQALGAA FQVADDILDV
EADTEALGKK AGKDADRNKA TLVASLGLEA ARKRRDTLSA EAIAALDSFP EGREAHILKE
AARFAATRKN