| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0393 |
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| Symbol | |
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| ID | 6199209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 453040 |
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| End bp | 454923 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641704385 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_001831535 |
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| Protein GI | 182677389 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC AGGATCATGC GGAAGCCGCC AAGACAATGC CCTCCCACCG CATTCAACTG
AGTGAGATCG CCCTTATAGG CGTCTATGAA ATCTCTAAAA TTCTGACTGC GCCGACCCGT
CTTGAGACGA CGCTCGCCAA TGTCTTGAAC CTGCTTTCGT CCTTCCTGCA GATGCGGCAT
GGCACGATCG TGTTGCTAGC CGATGACGGC GCGCCGGAAG TGGCGGTCGG AGCCGGCTGG
ACGGAAGAGG CCATGCCGGC GCCACAACGC TATCCGGAAA GGGCGATCGG CCAGATCGTG
GCGACGGCCG TGCCGCTTGT CGTGCATAAT GTCGCCGATC ATGAACTCTT CGACGCGAAT
GATGTCGCGG CGCTCGCCTC AGGGGGCGCG AAGGTCTCCT TCATGGGTGT GCCGATCCGG
GCCGGCGATC GCGTTGTCGG CACGCTCACA GTCGATCGCA TCTGGGATGG CGAAAGCGTT
TTCCGTTTCG ATTCGGACGT GCGTTTCCTC GTGATGATCG CCAATCTGAT CGGTCAAACG
GTGAAATTGC ATCGTGTCGT CGCGCGTGAC CGCGATCGTT TGATCGAGGA AAGCCATCGT
CTGCAAAAGG AAATCACCAA ATTGCAGCCG ATGCCGGTCA GCAAGGCGCG TGCTTCTGGT
ATCATTGGTG AAAGTCCGGC GATCCGTGCC GTTCTCGACA AGATTTCCAT TGTCGCGCGT
TCCAATGCGA CCATGCTGCT GCGCGGTGAA TCAGGCACAG GCAAGGAACT CTTCGCGCGT
GCCTTGCATG AAATGTCACC GCGCGCCTCC CATGCCTTCG TCAAGGTCAA TTGCGCGGCT
CTTGCCGAGA GCGTTCTTGA ATCGGAATTA TTCGGTCATG AGAAAGGCGC GTTTACTGGC
GCCGTGGCGA CCCGCAAGGG CCGTTTTGAA CTGGCCGATG GTGGCACGTT ATTTCTGGAT
GAAATTGGCG AAATTTCGCT CTCTTTCCAG GCGAAGCTTT TGCGTGTGCT GCAAGAGGGT
GAATTCGAGC GGGTCGGCGG CACCAAGACT CTCAAGGCCG ATGTGCGTTT GATCACGGCC
ACCAACAAAA ACCTTGAGGA AGCCGTGCGC AACGGCGAAT TCCGCGCCGA TCTTTATTAT
CGTATCAGCG TCGTGCCGGT GATATTGCCG CCCCTGCGGG AGCGCAGTAG CGATATTCCC
TTGCTCGCCG CGCGTTTCCT CGAACAATTC AACGAGGTCA ACGGACGCGA TCTGGTTTTC
AGCAAACAGG CGATGGAAGT GCTGAAATCC TGCTATTTTC CGGGCAATGT CCGAGAGCTC
GAAAATTGCG TGCAACGGAC CGCGACTTTC GCTGTGGGCG AGTCCATCGT GGCAACCGAT
TTCGCCTGCG GCCAGGATCA ATGCCTTTCA GCGACACTCT GGAAGGGCAA GACCTCGGCC
GAGGCCTGGC CGAGCAAAGC GATCGGTGGT CTTGGACCTT TCGGCTTGCC GGGCGGCCTG
ACGGAGCCTC CCCATCAGTC GCATCCGCAT CATTTGGAGG CGCAGCATTT GGCGCATCCG
CAGGCCTATT CGGCGCCGCC ACTCGCGCCG CCCCCCGTCG CCGTGCCGCA TATGCCGGCT
TCCCCCGTGC CCGCCTCTTC TCATCCGCAT GTCCCGCTTC CTCCGGTCAC GCCGAAACCG
GCTCCGAATG TCCAGGATGT CTGGGATGAA GGTGGAGTCC TGGTGGATGT TGGTGGTGGC
GGCGATACAG AGCGCGCGCG GCTCCTGGAA GCGATGGAAA AAGCCGGTTG GGTTCAGGCC
AAAGCCGCTC GCATCATGGG ATTGACGCCG CGCCAGATCG GCTATGCCCT GCGTAAGCAC
GGGATCGAGA TCAAAAAATT CTAG
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| Protein sequence | MNDQDHAEAA KTMPSHRIQL SEIALIGVYE ISKILTAPTR LETTLANVLN LLSSFLQMRH
GTIVLLADDG APEVAVGAGW TEEAMPAPQR YPERAIGQIV ATAVPLVVHN VADHELFDAN
DVAALASGGA KVSFMGVPIR AGDRVVGTLT VDRIWDGESV FRFDSDVRFL VMIANLIGQT
VKLHRVVARD RDRLIEESHR LQKEITKLQP MPVSKARASG IIGESPAIRA VLDKISIVAR
SNATMLLRGE SGTGKELFAR ALHEMSPRAS HAFVKVNCAA LAESVLESEL FGHEKGAFTG
AVATRKGRFE LADGGTLFLD EIGEISLSFQ AKLLRVLQEG EFERVGGTKT LKADVRLITA
TNKNLEEAVR NGEFRADLYY RISVVPVILP PLRERSSDIP LLAARFLEQF NEVNGRDLVF
SKQAMEVLKS CYFPGNVREL ENCVQRTATF AVGESIVATD FACGQDQCLS ATLWKGKTSA
EAWPSKAIGG LGPFGLPGGL TEPPHQSHPH HLEAQHLAHP QAYSAPPLAP PPVAVPHMPA
SPVPASSHPH VPLPPVTPKP APNVQDVWDE GGVLVDVGGG GDTERARLLE AMEKAGWVQA
KAARIMGLTP RQIGYALRKH GIEIKKF
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