Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0369 |
Symbol | |
ID | 6198649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 422900 |
End bp | 425248 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641704361 |
Product | TonB-dependent receptor |
Protein accession | YP_001831512 |
Protein GI | 182677366 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTTTC ATGGGGGCGA GATAGGGTTG AAACAACGCG GTTTTCTTAT CCATTGGTCA CATCTATCCG TCATTACCCT GCCCTGTCTG GCGATGGAAG CACACGCACA GACCGCGATC GTCGATAACG GATTGGAACT TCCTGTCGTT CATGTGCAGG CTGCGTCAAA CCGGCCGGTG CTTGCCGGGA CTATCCCGGA TACACCGGAA ACCGCCTATG AGGTCAGCAA CAAAGCCATC AATATTCTGT CGCCCGGCGG CAGCGCCAAT GCTTTCCGTG CTGTTTCCAT CCTACCCTCG GTTTATGCCC CGGCCATTGA TCCTTATGGT CTCGCGAATA TTCCCGGCAG TAACAAAGGC ATAAGGATCA GGGGCGAGGC CAGCTCACAC GGCAATAGCA TTAGCACAGT CGAGGGCATT CCCCTTGGGG GCGTCAATCC GGGCCCCGGT TTCCAATGGC TGTTTCCCAC GGAAAACGTG GACAGTATGC AGGTTTATCA GGGTCCGATC GCGCCGGATA AGGGCAGCTT TTTCACCACG GCGGGCGCGA TCAATACACA GCTTCGCTGG GGAGAAGACA AACCCGGTGC CGAGATCACC CAGGGCTTTG GCTCCTTCAA TTTCTTCCGT ACTTTCGCGC GTGTCGATTC CGGCGCTCTT TTCAACGGGA CGACGCATGC CTTTGCGTCG GGCTCCTGGA CCGATGCGGA GAATTGGCGC GGACCGGGCA AAGCCGCCAA TGGCAACACA ACCGCCTCTT TCGGCCTGAG TACGAAAATC ACCGATCAAT TCGATGCAAG ACTCTATTTC TCCTATGCCA ATATGCAGCA GAATACCTAT CGGCCCCTCA ATTATATGCA GACGCAGAAT CTCGGCCTTT ATCGCTTTTA TGATTATTCC GCCAATCCGA ATGCCGGCAT CGCTTATTTC AACAACAACC GGCAGAGCTT CGAGGATTGG GTGATCCTCT CCGAACTGAC CTATCATTTC AACGAAAACA CTCAGCTCAC CGTCAAACCC TATTATTTCA GTGAGAAAGG CGCCTATTAC GACGGCATGG CCAATGGCAT GGTCCGCAAC TGGCTCCTCG ACCATGATTC CTATGGTTTG ACGAGCGAGA TTTCCACCCG TCTCCTCGAG ACCGATATGA AGCTCGGTTA TTGGTGGACG ACGATGCAGC TGCCAGGTCC GCCCAATGCC TGGAAGATGT ATATGCCTAA CGCCTATGGC GGCTTGAATT TCAACATGTG GTCCATTCTC GCCCAGGCGA CGACCCGCAA TGAATTCCAA AGCGCCTATG CCATGATGGA CAAGAAGATC GGCCCCCTGC ATTTGCAGGC CGGAGCCCGC TACATGTGGG AGAATATCCC CGGCATCAAT GCCTTCAATA CGATGGGCGT CAGCGATACT TCCTATAATG CCGCCATTGG CATGGCCCCC GGCATCAACG GCATGCGAAG CGTTTCAAGC CATGTGTTCG GGGCCTTTCT GCCCTATATG GCAGCAAGCT ATGACCTGAC CCCAAATTTG CAGGCGAATA TGAGTGTCGG CGCCAATTAC GGCGCACCGT CCTTCGACAT TTTCCCTGCC TACCAGCAGA ATGCCGCAAC TTTCCAAGCG AAAGGCATTA GCGCAGACCA GCTATGGAGC ACTTTGAAAG CCGAAACCTC GACCAATATC GATGTTGGAT TGCGCTGGAC CTATGAAAGC CCCGATATTG GCACGGCTTT GCTCGAACCG CGTTTCTATT ACGCCAAATA TGCCAATAAG GGTGTATCCT TCGATCCCGG CATCGGCGTC GCCTATAGCC AGAATGTCGC CGACACCCAT GCGATCGGCG GCCAATTAAT GGCGCATTGG CTCCCGCGTC CGGAACTCGA TCTCTTCGCC TCGGTTGGCT ATACACGGAA TGTCTTCGAC GCCAATCTGC CGACACTCCC CGGCGCTTCC GCCGCGACCA TCATGGCGGC TGCGGTCAAG GGCACGCAAT TTCCCGATGT TCCCAATTGG ACCATGGCGG CCGGCCTCAA TTGGTCTACA CGCGACCCCT GGCTCGGCGA CGGTCAACTC ACGATCTCAC CGATCATCAA TTATATCAGC GACAGATGGG GCGATACGAC CCGTACACAG CATCTTTCCG GCTATGCCAC GGTCGATCTC AATATTGGTT ATGATTATCA GACCCCTATT GGCCTGTTCA ATGCCAGCCT GACAGTCACC AATCTGTTCG ACACAAGCTA TATCGGCTAC TTGAATACGA GCTATTATCA ACAGGCTATG GGGACCAACG CTTATTATTA TCCCGGCGCG CCGCGCGCCT TCCTGGGCCG GCTCGCCCTG AAGATTTGA
|
Protein sequence | MAFHGGEIGL KQRGFLIHWS HLSVITLPCL AMEAHAQTAI VDNGLELPVV HVQAASNRPV LAGTIPDTPE TAYEVSNKAI NILSPGGSAN AFRAVSILPS VYAPAIDPYG LANIPGSNKG IRIRGEASSH GNSISTVEGI PLGGVNPGPG FQWLFPTENV DSMQVYQGPI APDKGSFFTT AGAINTQLRW GEDKPGAEIT QGFGSFNFFR TFARVDSGAL FNGTTHAFAS GSWTDAENWR GPGKAANGNT TASFGLSTKI TDQFDARLYF SYANMQQNTY RPLNYMQTQN LGLYRFYDYS ANPNAGIAYF NNNRQSFEDW VILSELTYHF NENTQLTVKP YYFSEKGAYY DGMANGMVRN WLLDHDSYGL TSEISTRLLE TDMKLGYWWT TMQLPGPPNA WKMYMPNAYG GLNFNMWSIL AQATTRNEFQ SAYAMMDKKI GPLHLQAGAR YMWENIPGIN AFNTMGVSDT SYNAAIGMAP GINGMRSVSS HVFGAFLPYM AASYDLTPNL QANMSVGANY GAPSFDIFPA YQQNAATFQA KGISADQLWS TLKAETSTNI DVGLRWTYES PDIGTALLEP RFYYAKYANK GVSFDPGIGV AYSQNVADTH AIGGQLMAHW LPRPELDLFA SVGYTRNVFD ANLPTLPGAS AATIMAAAVK GTQFPDVPNW TMAAGLNWST RDPWLGDGQL TISPIINYIS DRWGDTTRTQ HLSGYATVDL NIGYDYQTPI GLFNASLTVT NLFDTSYIGY LNTSYYQQAM GTNAYYYPGA PRAFLGRLAL KI
|
| |