| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0197 |
|---|
| Symbol | |
|---|
| ID | 6201262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 232382 |
|---|
| End bp | 233179 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641704191 |
|---|
| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
|---|
| Protein accession | YP_001831342 |
|---|
| Protein GI | 182677196 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0354392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.896388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC CTGCTTGCCA GCCGACGTTC TTCATCCCGC ATGGCGGCGG GCCCTGCTTT
TTCATGGACG ATCCCGCTGG CACCTGGACC CAAATGGCCG CATTTCTCCG TGGCCTGCCC
AAAACCCTGC CGGAGCCGCC GCGCGCCATT CTGGTGATTT CGGGCCATTG GGAAACGCAA
GGTTTTGCGA CAACCGACAG CGCTAAACCG GATCTGCTCT TCGATTATTA CAATTTTCCA
CCGCATACTT ATGAATTGCG CTATCCCGCG CCCGGCGCCC CGGCGCTTGC CGAAAAAGTG
GCCGATCTCT TGAAACAGCA GGGGTATCAG ACCACGCTCG ACAAGACACG CGGTCTCGAT
CATGGCGTCT TCATTCCCTT GAAAGTCGCA TTTCCCGAGG CCGATATACC GGTGGTGGAA
TTGTCACTCG ATAAAGGCCT CGACCCGGCT CTGCACCTTG CCGTCGGCCA CGCTCTGGCG
CCGCTCCGAG ATGAAGGCGT GCTGATCCTC GGCGCAGGGA TGAGCTTTCA CAATATGCGC
GGCTACGGCG ATCCGAAGTT TACGCAGCCT TCACAAGCGT TCGATCAATG GCTGCTCGAA
ACCGTGACCG CTCCCGCCGA TCGGCGCGCG GAACAGCTCA CCCATTGGGC CGAGGCGCCC
GCCGCCCGTC TCTCGCATCC GCGCGAGGAA CATCTCCTGC CCCTCATGGT TGTAGCCGGG
GCCTCCGACA AACCCGGAAC GCGCGTCTAT TCGGAAACGG TGATGGAGAC GGCACTTTCC
GGCTTCCGTT TCGATTGA
|
|---|
| Protein sequence | MNKPACQPTF FIPHGGGPCF FMDDPAGTWT QMAAFLRGLP KTLPEPPRAI LVISGHWETQ
GFATTDSAKP DLLFDYYNFP PHTYELRYPA PGAPALAEKV ADLLKQQGYQ TTLDKTRGLD
HGVFIPLKVA FPEADIPVVE LSLDKGLDPA LHLAVGHALA PLRDEGVLIL GAGMSFHNMR
GYGDPKFTQP SQAFDQWLLE TVTAPADRRA EQLTHWAEAP AARLSHPREE HLLPLMVVAG
ASDKPGTRVY SETVMETALS GFRFD
|
|---|
| |