Gene Bind_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0195 
Symbol 
ID6200173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp230868 
End bp231956 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID641704189 
Productmultidrug resistance protein MdtN 
Protein accessionYP_001831340 
Protein GI182677194 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0296812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG CAGGTGCCCC GAAACGCGGT TTGCTTATCC GCATCATCGT CCTGGCCGTG 
ATCGGCTACG GCCTTTTCCT CGCGTGGCAG GCCTATCGGC AAGACAGGGA TTTTCCCTAT
TCCGATGATG CCTCGCTCGA TGCCGAGGTC GTGCATGTCG CAGCCTCCGT CGGCGGACGG
CTGCTCAACC TTCCGGTGCA TGAAAATCAA GCCGTGCGGG CGGGTGATCT CCTGTTCGAA
CTTGACCCCG TACCCTATCG GCTGGCGGTG GAACAGGCCA AAGCCGATCT CGATCTCGCC
AAAGCCGCGC TGGCGACACG TCGCCGGGTG ATTACAACCG AGACCGCCGC CGCCAATATC
GCCAAGGAAC AGACGACCCG CGCGAAGACC AATTATGAAT TGGCCGTGCG CACGGCGGAA
CGGCTGGCAC CGCTCGCCGC GAAGAATTTC GTTCCCAAAC AGCAATATGA CAATGCCGAA
GTGGTGCGGC GCGACGCGGC GACGAGCCTG TCGCAGGCAC AGCGCCAGGA GGCCGCGGCT
ATCGCGGCAA TCGGTGATAC ATCGGGCGAG GAAGCCGCCA TCCGAGCGCG CGAGGCGGCG
CTCGCCATTG CCGAGCGCGC CCTTGAAAAT ACAATCATGC GCGCGCCGCA TGCCGGACGC
ATCGCCGGCC TCAAGGTCAC CACAGGCGAA TTCATCGCTC CGGCACAATC CCTGTTCACC
TTGATCACGA CCGATGAATG GTTCCTGATC GCCAATTTCC GTGAATCGCA ATTGCCTGTC
ATCAAGGTCG GTGATTGCGT GACAGGCTAT TCCATGATCG ACCGGACGAA GCCCCTGCAT
GGGCGCGTCC AGGGCATCGG CTGGGGCGTT CTCGAAGCAA GCGGTCCGAT TCTGCCACGC
CAGCTCCCCT TTGTGCAGCG CTCCTTGAAC TGGGTACGCG TGGCACAGCG TTTCCCGGTC
CGCGTGCATC TTGAGGAGCC GCCGGAGGAA CTCATGCGGA TCGGCGCCAG CGCCAGCGCG
CAGATCCGCT ATGGCGCCGC CTGTCAGGGA CAAGAAAACG AGGGGAATGA TGCCGCGGCA
CATTCTTGA
 
Protein sequence
MKAAGAPKRG LLIRIIVLAV IGYGLFLAWQ AYRQDRDFPY SDDASLDAEV VHVAASVGGR 
LLNLPVHENQ AVRAGDLLFE LDPVPYRLAV EQAKADLDLA KAALATRRRV ITTETAAANI
AKEQTTRAKT NYELAVRTAE RLAPLAAKNF VPKQQYDNAE VVRRDAATSL SQAQRQEAAA
IAAIGDTSGE EAAIRAREAA LAIAERALEN TIMRAPHAGR IAGLKVTTGE FIAPAQSLFT
LITTDEWFLI ANFRESQLPV IKVGDCVTGY SMIDRTKPLH GRVQGIGWGV LEASGPILPR
QLPFVQRSLN WVRVAQRFPV RVHLEEPPEE LMRIGASASA QIRYGAACQG QENEGNDAAA
HS