| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0184 |
|---|
| Symbol | |
|---|
| ID | 6200374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 218280 |
|---|
| End bp | 220094 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641704178 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001831329 |
|---|
| Protein GI | 182677183 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.981711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTG CGCGATGGCA CTCGATGCCT TGCCGCTTGC TGCTGTTCGC GCTAGCCGCC
ATTTTGATCC TCGGATTTGA CGGCGCCGCC CGCTATGTGG CTCAGCGATC CGTGCTCTCG
GAACTCGGCG CAGCGGCGAA AATCGCGGCG AGCCTCCGAG TCGCTATGTT GCGCAATGAA
ATTGAAAAGC AGCGCACACT TCCCATCGTG CTGGCACAAG ATCCGGATGT TCGGGCAACG
CTCGAAAGAG GCGGATCTGT CCGCCTTGCT GCCCTAAACG CCAAGCTTGA GGCATTGGCT
GCCGCCACTC GTGCTGGCGC AATTTACCTC CTGGATGCTA ACGGCATCGC GATCGCCGCG
AGCAATTATC GTATGCCCAC CAGTTTCGTC GGGACCAATT ATGCGTTCCG CCCTTATTTC
AAAAGGACCC TGGAGGAAGG AAGTGCCGAG CATTTTGCCT TTGGTACCGT TAGTCATAAA
CCAGGGCTCT ACCTGACACA ACGGTTGGAC GGTCCAACCG GGCCGCTTGG TATGCTGATT
GTGAAAGCGG AATTCGACGC GGTCGAGGCT GAATGGCGGC ACGGCACGGC GCCTACTTTC
GTCAGCGACG AGCGTGGCAT CATTCTGGTG ACAAGTGAAC CGTCTTGGCG TTTTCGCACA
AAGACGCCGA TCCCGGTCGA GCGTCGCGCC GAAATCCTGG CCAATCTGCA ATTTGGTGAT
GCTAAACTCG ACCTTCTCCC ACTACACACC AACACTGGAA GTATAGGTCT CGTGGAAGCG
ACATTGCCTG GTGAATACAG GCCTCGCTAC TTCGTTGAAG GGGGCAGCAA GGTTTCTTCG
ATTGACTGGA CGCTCCACGT TTTGACGCCG ACAGAGACCA CGATGAAACT AACGGTCACG
GCTTGGCGCT CCCTAACCTT GCTTTTAGTC ACCGTAGCGC TTGGGGTGGT GGGATTATGG
TTGTCTCGAC AGCATCGCTT GGTCGAGGAA AGGAAACAGC ACGCGACGGC GCGCCGGGAG
CTCGAGAATA TGGTTGAACA CCGTACCAAG GAGCTTCGCC ACATCAATGA ACGTTTGACT
GCTGAAGTCG AGAAACGCGA ACATGCGCAA ATAGCTGTAC ATAATCTGCA GGACGAATTG
GTTCAGGCAA GTAAGCTTGC CGTTCTCGGT CAGATCGCAG CAAGCGTAGC TCATGAAGTC
AATCAACCAG TCGCCGCGAT TCGGACCTTC GCCGAGAATT CACAAGTTCT TCTCATTCGA
GGTGATACAG GCACTGCAAG AATCAATCTC TCGACGATTG CAGGTCTGAC AGAACGCATC
GGCACTATCA TGGATGAACT TCGTGCTTTC TCACGCAAAA CAACAAGTGA GAAGGAACCC
ATCTCCCTGC GGGAGACCAT CGACGGAGCG CTTCTTCTGG TCGGACATCG TCTCAAGCAG
CAGACAATTA ATTTATTCGT CGATCTGGCA GATGCGGATA TTGTGGTGGC GGCAGAGCGT
ATCCGACTCG AACAAGTTTT TGTAAACTTA TTGCAGAACG CCATCGAGGC TGTGTCCAAT
CAGCCCGATG GATCCATCCA GATCTTGGCC CGACCAACGG CGGAAAACGT TATCGTGACG
ATCGCCGACA ATGGGCCAGG CTTTCCCGAT GCCGTCATGA CTGCTCTTTT CATGCCCTTC
ACGACCACTA AGCCAGATGG AGTTGGGCTC GGACTCCTGA TTTCCCACGA CATCCTTAAT
GAGTTCAACG GTACGCTCGC TGTGGAAAAT TGTGACGGCG CCACGTTGAC CATTACCCTA
CCGAGAGTCA ATTGA
|
|---|
| Protein sequence | MGIARWHSMP CRLLLFALAA ILILGFDGAA RYVAQRSVLS ELGAAAKIAA SLRVAMLRNE
IEKQRTLPIV LAQDPDVRAT LERGGSVRLA ALNAKLEALA AATRAGAIYL LDANGIAIAA
SNYRMPTSFV GTNYAFRPYF KRTLEEGSAE HFAFGTVSHK PGLYLTQRLD GPTGPLGMLI
VKAEFDAVEA EWRHGTAPTF VSDERGIILV TSEPSWRFRT KTPIPVERRA EILANLQFGD
AKLDLLPLHT NTGSIGLVEA TLPGEYRPRY FVEGGSKVSS IDWTLHVLTP TETTMKLTVT
AWRSLTLLLV TVALGVVGLW LSRQHRLVEE RKQHATARRE LENMVEHRTK ELRHINERLT
AEVEKREHAQ IAVHNLQDEL VQASKLAVLG QIAASVAHEV NQPVAAIRTF AENSQVLLIR
GDTGTARINL STIAGLTERI GTIMDELRAF SRKTTSEKEP ISLRETIDGA LLLVGHRLKQ
QTINLFVDLA DADIVVAAER IRLEQVFVNL LQNAIEAVSN QPDGSIQILA RPTAENVIVT
IADNGPGFPD AVMTALFMPF TTTKPDGVGL GLLISHDILN EFNGTLAVEN CDGATLTITL
PRVN
|
|---|
| |