Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0137 |
Symbol | |
ID | 6201285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 161253 |
End bp | 164000 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641704133 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001831284 |
Protein GI | 182677138 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.193132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.854443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGCAC GCCCCTTTTT CCGAATTCTC TTCGTTGCTG TTGTCGCCGT CATCAGCCAC GCCAGTTATG CCGAGGCCGC CGAGAAGCGC ATCGCGCTGG TGATCGGCAA TAGTGCCTAT CAGGCGGACC CCTTGGCAAC ATCGGCCAAT GACGCGGGCC TGATCGCGCA AAGTTTGCAG GCCGCCGGTT TCGACGTGGT CGGCGCCCGA GATCTCGACG CCGCGACGCT GCGCTCGGCG TTTCACGAAT TTCTCGACAA GGCCGGAGCT TCAGGCCCCG AGACCGTCGC GCTCGTCTAT TTCGCTGGGC GAGGATTGCA ATTCGAAGGC GAGAATTATC TCGTGCCGGT GGATGCGCGG ATCACGCGCG ATACCGATGT GCCGATCGAG GCTTTCCGCC TGACCGATCT CACGCAGCCA CTGACGGCCC TGCCCCTCAA AGCGCGCATT TTCATCCTCG ACGCGGCACG CGCCAATCGC TTCGCCCCGG CAGGCCAGCC GCTGGCCGGC GGCCTGGCCT TGATGCAGCC CGATCCCGGT ACATTGATCG CCTTCAATGC CGCGCCCGGA ACGATCGCCC CCGAGAGCCA GCAAGCCTAT GGCGCCTATG CTTCCGCCTT GACAGAAATG ATCAAGGAGG GCGGCCTGCC GCTCGATGAA TTGTTCGAGC GCGTCCGGCT CCGCGTCAAT GCCTTGACCA ATGGCGCCGA AGTCCCCTGG TACGTTTCAC GCGTCGAGGC GCCATTCCTG TTCTTTGAGC GCACCAGTGC CGCGCCACCC GCTCAAGCCG ACCGGTTCGC CGAATTAATG TCCAGGCCGA TCGACAGTTT CGACGTGCAT GATGCCTATC TCGCCGCGCT GACGCGCGAC ACCCTGCGCG GCTATCAGGA TTTTCTCGCG GCCTATTCAA ACGATCCGCT CGCCCGGCGC GTGCGGGCCA TCATCGCGGT GCGCCGCGAG GCCATGACCT GGCGCCAGAC TGTCTTCGCC GATACACCCG ATGCCTATTG GTCCTATCTG CGCCGCTATC CACGCGGTGC TCACGCCGAT GATGCGCACC GCCGCCTCGC GCATTTCGCG GCCGCCCTGG AGCCCCCAAG CACTTTCGCC GCAATCGATT ATGACGTTCC ACCACCGCCG CCGGAGGAGA TTGTTTATGT CGAGCGTCCG GTCGTCTCCT TCGCGGACCC CGAATACGAT CTGCCGCCTC CGCCTCCCGT GCCGGTCTTT TTCCTGCCGC CACAGCCGGT CTATTTTGTG GATGCGCCGC CACCGCCGCC GCCCGTCGAT GAATTCGTGC TGCCGATCCC AGTTTATCAG CCGGTTCCCT CATGGATCGA GCGGCCGCAC TACGTCGCGC CGCCGCCGGT GAATGTGATC AACGCGAATA TTCATAATAA TGTGGAGGTC AATCCGGCCA GTCAGACCGT GGTGGTGACA AACCCCGCCG GCCAGCAAAT TGCGCCGCTT CCCACCAATC TTTTACCCGC GCAACCCGCC GCGCCGGTCG AGGGCCAGCC GAATTTCGTC GAACGCCATC CCGGCGCCAG CGCCGTGATC GGCGCGGCGG CCGTCGCCTT GCCCACGGCC GCGCTCCTGC ACGCGCGGCA AAAGGCCGGA CAGAGCCCTG TTCAGGGGCA ATCACCCACG GTCCCAGGCC AGGCGGTTGG GCCAGGCCAG CAAGCCACTC CCCTTCAGGC AACGCCTAAT CCAGCGGTGA ATCCGCCAAA TCAACACCCC AGTGTGCCTT CGGTACAAGG GGGACAACCC TTGCCCGAAC CAAAGGCTCC CACAGTCACA GATCATGGCC CAGATCACGG GGTGCCACCG CATGGTCCCA GCGCGGCGCC AACACCGCCC ACACTTCCCG GTCAGGTTGG GCCAGGCCAG CAAGCTACTC CCCCTCAGGT AACGCCTAAT CCCGTGGTGA ATCCGCCAAA TCAACACCCC AGCGTGCCTC CCGTGCAAGG GTTGCCCCCC TTGCCCGAAC CAAAGGCTCC CACAGTCCCA GATCATGGCC CAGATCACGG GATACCAGCG CATGGTCCCA GCGTGGTGCC AACACCGCCC ACACTTCCCG GCCAGGCTCC GGCGGTCAAT CAGCACCCGC AGCAACATCC CGCTTCGCCG CCCCCATCGA CAATCCAAGA GGGGCAGCCG CTTCCGGCCC AGAAGGCTCC ACCGCCCGTG GAACATGCCG CACCGCCGCA TAATGCTGGC AGAGCCCAAA CGCCCGTTGT TCCTGTTCCA CCGACGGAGC CGCATCCCAA CGCACCCGGC CTCACCGCGC CGCATCCTGC GCCTCCCGGT CAGGCGCCAG CAGCGCATCC GCAAACACCA CAGCCTCCGA GTGTCAATCC GCACGAGCAA CATCCTGGCG CGGCGGCTCC GGTGCCAGCA GGGCAAGCAC CCCTCCCCAA ACCGCTCCCT GCCCCGGATC ACAATGCGCC GCCACACAGC ACCGGTGCCA TGCCAGCACC ATCCGCACCT ACCGCACCCG CCGGCCACAC GCCCCCGGCA CCTCATCCGC AAGCCATTAT TCCAGCGGAG CCACAAGCGC GGCCATCGGC GCCATTACCA GAAAGGCATC CAGCGCCACC CATTGCCCCA CCGGCTGCAC CGCCCAAGGT CCAGCAGAAA TTACAACAGC GACAGGTCAT CCAGCCACAG GAGCGAGCCG CACAACCCCA TCCACCGCAA CAGAAACAGT CTGAATGCGG ACATCCAGGC GCGCCGCCAT GTCATTAG
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Protein sequence | MPARPFFRIL FVAVVAVISH ASYAEAAEKR IALVIGNSAY QADPLATSAN DAGLIAQSLQ AAGFDVVGAR DLDAATLRSA FHEFLDKAGA SGPETVALVY FAGRGLQFEG ENYLVPVDAR ITRDTDVPIE AFRLTDLTQP LTALPLKARI FILDAARANR FAPAGQPLAG GLALMQPDPG TLIAFNAAPG TIAPESQQAY GAYASALTEM IKEGGLPLDE LFERVRLRVN ALTNGAEVPW YVSRVEAPFL FFERTSAAPP AQADRFAELM SRPIDSFDVH DAYLAALTRD TLRGYQDFLA AYSNDPLARR VRAIIAVRRE AMTWRQTVFA DTPDAYWSYL RRYPRGAHAD DAHRRLAHFA AALEPPSTFA AIDYDVPPPP PEEIVYVERP VVSFADPEYD LPPPPPVPVF FLPPQPVYFV DAPPPPPPVD EFVLPIPVYQ PVPSWIERPH YVAPPPVNVI NANIHNNVEV NPASQTVVVT NPAGQQIAPL PTNLLPAQPA APVEGQPNFV ERHPGASAVI GAAAVALPTA ALLHARQKAG QSPVQGQSPT VPGQAVGPGQ QATPLQATPN PAVNPPNQHP SVPSVQGGQP LPEPKAPTVT DHGPDHGVPP HGPSAAPTPP TLPGQVGPGQ QATPPQVTPN PVVNPPNQHP SVPPVQGLPP LPEPKAPTVP DHGPDHGIPA HGPSVVPTPP TLPGQAPAVN QHPQQHPASP PPSTIQEGQP LPAQKAPPPV EHAAPPHNAG RAQTPVVPVP PTEPHPNAPG LTAPHPAPPG QAPAAHPQTP QPPSVNPHEQ HPGAAAPVPA GQAPLPKPLP APDHNAPPHS TGAMPAPSAP TAPAGHTPPA PHPQAIIPAE PQARPSAPLP ERHPAPPIAP PAAPPKVQQK LQQRQVIQPQ ERAAQPHPPQ QKQSECGHPG APPCH
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