Gene Bind_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0116 
Symbol 
ID6201394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp132371 
End bp132988 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID641704112 
ProductXRE family transcriptional regulator 
Protein accessionYP_001831263 
Protein GI182677117 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0574196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTCG AGGGACGCGA TAAGGTCAAG GTTCTGGAGG CGGGTGCGGC GGCTTTATCG 
AGCCAGCTTG GCAAAACCGT CCAACGGTTG CGCAAGGCCT ATAATCTCTC GTTGTCCGAA
TTATCCGAGC AATCGGGGGT TGCAAAATCG ATCATCAGCC AGATCGAGCG CAACGAGACC
AATCCGACGC TGGCGACCAT CTGGCGGCTT TCGCAGGCGC TCGATGTTTC GATTGAGCGC
GTGTTGCAGG CGACCGAGGA TGAACCTTTC CTGGAAAAAG CCTCCAAGGG GGACACACCG
ATTCTAGTTT CCGATGATGG CAAATGCCGG CTGGCGATCA TCGGCTGGAT CAAGACGGTC
GAATGGCTGC AATGGTATGA TTTTGCGGCT GATCCCGGTG GCATTCTCGA ATCGGAGGCG
CATCAGCGTG GTTCCGTCGA AAGCCTTTCG GTGAGTGTGG GCGAACTCGA GATCGAGGTC
GGCGGCGTGA TCGAACGCGC CAAGGCGGGC GAAACCCTGC GTTATCGTTG CGACCGGCCG
CATACCATCC GCAATGTCTC GCGCAAGCCC GCCTCGGCGA TGATGGTTTG CATCCTCAAA
GCCGCCGCCA TGGAATGA
 
Protein sequence
MGVEGRDKVK VLEAGAAALS SQLGKTVQRL RKAYNLSLSE LSEQSGVAKS IISQIERNET 
NPTLATIWRL SQALDVSIER VLQATEDEPF LEKASKGDTP ILVSDDGKCR LAIIGWIKTV
EWLQWYDFAA DPGGILESEA HQRGSVESLS VSVGELEIEV GGVIERAKAG ETLRYRCDRP
HTIRNVSRKP ASAMMVCILK AAAME