Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0105 |
Symbol | |
ID | 6200772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 118665 |
End bp | 120113 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641704102 |
Product | sugar transporter |
Protein accession | YP_001831253 |
Protein GI | 182677107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC GGGCCATGGT GGATTACGCG CAGGCGCATA GCCTTGCTGT TTCGGTCATC GAGACCTTGC CGCAAGACCG TCCGGGTGGT GTCGCTGAGG CTGAACGTTT CGTCATCATC GTCACGATCG TTGCCGCGCT CGGCGGCTTG TTGTTCGGTT ATGATACCGG CATTGTTGCC TCGGCGTTGA TCTATATCAC CAAAACTTTT GATCTTTCGA CCTTTGGTCA GGAATGTGTG GCCGCCGCGC TCAATGTCGG CGCAGTTTTC GGCGCTGCCT GTAGCGGGCC GATTTCCGAT CGTTTCGGCC GCCGGCCCAC CGTGCTTCTC GCCTCACTCG TCTTCATCAT CGGCTCGGTG GGCAGTGCTT TCGCCCCCGA TGTACCGGTT CTCCTCGTGG CGCGTCTGGC GCTTGGGGCA GCCATTGGCG CCGCCACGCA GATCGTTCCT GTTTACGTCG CCGAACTTGC CCCGGCCCAT CGGCGCGGCG CTTTGGTCGT GATGTTCCAG CTCATCTTTT CGCTCGGCCT GCTTTCATCC TTCTTCGTCG GCTATCTGCT TTCCGGCGGG ACAGAATCCT GGCGCATGAT GTTCCTTCTT GGCGTTGTGC CGGCCATTCT GCTTGGCGTC GGCATGCTGT TCTTGCCGGA AAGCCCACGC TGGCTGTTCC TCAACAAGCG CGAGCGCCAG GCCGTTCTGA CCCTTGATAA ATTGCGGGGC GACCCGCTCG CCGTGCGCCA GGAATTGGAT GAAATTCTGG AAGCCAGCCG GACGCCCAAT GGCGGCTGGC GCACCTTGAC CAAGAAATGG GTGCGTCCCG CATTGATCGC GGGCCTTGGC GTCGCGATCC TGTCGCAACT CTCCGGACCC AATGTCATCG TCTATTATGC GCCGATCATC CTGACCGATG CCGGATTCGG CGATCAGGCG GCGCTCTTGA CCTCGGTGTC GGTCGGTGTG GCCTCGACGT TGACGACGAT CATGGGCATG CTGTTGATCG ATCGGATCGG ACGGCGCCGG CTGATGCTCA CGCTGCTGCC GATGGCGGTT CTCTCGCTTT TGCTGCTCGG CGCGGTTTTT CTCGGCGGTC CAATGACCGG TATCCGCGTG CCTTTGATGC TGCTCGGACT TCTGGGCTAT ATCGTCTTCA ATTTTGGCAG TCTGTCGGTC GCCGTTTGGC TCATCGCCTC GGAAGTCTTT CCGCTCATCA TTCGTGGCAA GGCCATGGGA TTGGCCGCCG TATCTGTCTG GGCGAGCGAT ATTGTGATCT CGCTCAGCAC CTTGTCGCTC GTCGAGGTTT TGGGGCCGAC GGGCACGTTC TGGCTGTTTG CCGGGGTCAA TGCCATCGCC GTCTGGTTCG TCTGGCGCTA TGTACCAGAG ACGGCGGGTC ATTCGCTGGA ACAGATAGAG ACTTCGCTGA AGGAAGGCAC CTTCCAGCCG CATTCGTGA
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Protein sequence | MNERAMVDYA QAHSLAVSVI ETLPQDRPGG VAEAERFVII VTIVAALGGL LFGYDTGIVA SALIYITKTF DLSTFGQECV AAALNVGAVF GAACSGPISD RFGRRPTVLL ASLVFIIGSV GSAFAPDVPV LLVARLALGA AIGAATQIVP VYVAELAPAH RRGALVVMFQ LIFSLGLLSS FFVGYLLSGG TESWRMMFLL GVVPAILLGV GMLFLPESPR WLFLNKRERQ AVLTLDKLRG DPLAVRQELD EILEASRTPN GGWRTLTKKW VRPALIAGLG VAILSQLSGP NVIVYYAPII LTDAGFGDQA ALLTSVSVGV ASTLTTIMGM LLIDRIGRRR LMLTLLPMAV LSLLLLGAVF LGGPMTGIRV PLMLLGLLGY IVFNFGSLSV AVWLIASEVF PLIIRGKAMG LAAVSVWASD IVISLSTLSL VEVLGPTGTF WLFAGVNAIA VWFVWRYVPE TAGHSLEQIE TSLKEGTFQP HS
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