| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0104 |
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| Symbol | |
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| ID | 6201690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 117724 |
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| End bp | 118578 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641704101 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001831252 |
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| Protein GI | 182677106 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.790482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC ATCATTTCCT GAGCCTTTTG ACCGGCTCTT TTTCAACGCC TTCGGATGAT
AATCCGACCG TGGCTATGGT CGAGGCGGCT TATCGTCATC ATGGCATCAA TGCCCGTTAC
ATCAATTGCG ATGTCAAGAA AGACAATCTT GCCGATGCCA TTCGCGGCGC CAAGGCGATG
GAATGGATCG GCTTCAATTG CTCCATGCCG CATAAGGTGG CGGTCATCGA TCATTTGGAC
GGGCTCGCCG AATCCGCTGC CATCATCGGT GCTGTCAATT GCGTGGTCAT CGCCGACGGC
AAGCTGACGG GTCATAATAC TGATGGCCAG GGCTTTCTGA CCTCCCTGCA AAGCGTGACC
GATCCCAAGG ATAAACGCAT TACCTTGCTC GGCGCTGGTG GCGCGGCGCG GGCCATTGCC
GTGGAATTGG CGCTCGCCGG TGCCACGCAT ATTGGCATTG TCAATCGTGA TCAGAGCCGT
GGCGAATCAC TTGCCAAATT GATCAGCGAG AAGACCAAGG CCAAGGCGGA TTTCATTCCC
TGGACCAGCG GCTATCGCGT TCCTGAAACA ACCGATGTGC TGGTCAATGC GACGTCCATC
GGGCTTGGCG ACGCCGAGGC ACTGCCTGAC ATTGACACGG GCTCCTTGCG CAAGGGAATG
ATCGTCGCCG ATGTCATTTT CAATCCGCCG CGCACACATC TTCTGCGCAA GGCGGAGGAA
CAAGGTGCCG TCACGCTCGA CGGGCTCGGA ATGCTGGTTA ATCAAGGCCG TGTCGGCATC
AAGCTCTGGA CCGGCAAGGA TGTCGAAGCC TCTGTCATGC ACGCGACGCT GGCGACCCTG
TTCGGCGTCG CCTGA
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| Protein sequence | MSEHHFLSLL TGSFSTPSDD NPTVAMVEAA YRHHGINARY INCDVKKDNL ADAIRGAKAM
EWIGFNCSMP HKVAVIDHLD GLAESAAIIG AVNCVVIADG KLTGHNTDGQ GFLTSLQSVT
DPKDKRITLL GAGGAARAIA VELALAGATH IGIVNRDQSR GESLAKLISE KTKAKADFIP
WTSGYRVPET TDVLVNATSI GLGDAEALPD IDTGSLRKGM IVADVIFNPP RTHLLRKAEE
QGAVTLDGLG MLVNQGRVGI KLWTGKDVEA SVMHATLATL FGVA
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