Gene Bind_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0081 
Symbol 
ID6200830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp90246 
End bp91397 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content61% 
IMG OID641704078 
Producthigh-affinity nickel-transporter 
Protein accessionYP_001831229 
Protein GI182677083 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.940198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC GCCGCATGCC ATCACTCCGC TTGGCCTCCT TTGGCCGACC CCACAGGCTC 
CTGGTTCTGA CCGGCCTCAT CCTTTGTGGT TTTGCTATGA GCTCCGGCTT CGCCCAGGGC
GTCCACCATC CTTTTGCGGT CGGCGTCAAC GAGGGTGCAG CCTCCACGCA AGGTGTGTTT
GGTTTCTTGC TGGGCGAGGA AAGCCGTTTC TATCAGCGTC TGACCGCAGC TCTCCGCGCG
AGCCGCACCG ATGGCGGCGC GGCGGCCACC CTCATCGCCT TGAGTTTCGC CTATGGCATC
TTTCACGCAG CCGGTCCTGG CCATGGCAAG GCGGTAATTT CCGCCTATCT TCTCGCTAAT
GAAAAAATGG TGCGGCGCGG GCTTGTCCTG TCCTTTTGCG CGGCCTTGCT CCAGGCCGGC
GTGGCCATTG CGCTGGTCAC CATCGCCGCG ATGATGGTGC ATGCGACCGC GCGGCAAATG
ACTGATACGG CGCATATTCT CGAAATCGCC AGCTATGCTG GCATGGCTAT CCTTGGTGCG
AGTCTCACCT TCAACAAAAG CAAAAAGCTC GTCGCCATGG TCTTGGCCGC GCGGGATCAG
GCCGCGCGCA AGATGCCGGC GGGCCTTGTT TTTACACCCG CCGGCGCATC CTCAAACTTC
ACCGCAGCAC CGCGTGCATC GGCCTTCAAG GCCGAATCCG TCGACCCCGC ATCACCCATC
GGTGCATCCA CGGGCGCACA AGCCTTCGCT TGCGATGACG GTTGCAACCA TCTGCTGACT
CTTGCGCCGG ATGCCTCGGA CAAAGGCATT AAAAGTGCCC TGCTCGCCGT TCTGGCGGCT
GGAACGCGGC CCTGCTCTGG AGCCATCCTC GTGCTGATTT TCGCTTTGTC GCAGGGGATC
TTTCTGACCG GCGTCAGCGC CACTTTGGCG ATGGCGCTGG GCACGGCCAT CACCACCGGT
GCGCTCGCGC TCTTGACCGT TTTCGCCAAA ACCTCGGCGC TCAAACTGGT TGCCGCCAAG
ACGCCGCTCT CCGGTGGGCC CTATGGCCCT GTGCTCTTGT CCCTCTTCGA GATGGGCGCT
GCTTTGCTGG TGCTACTGTT TGGCCTCGTG ATGTTGGGGG GCAATTATTT CGGGAAAACA
ACTATTTTCT AA
 
Protein sequence
MPQRRMPSLR LASFGRPHRL LVLTGLILCG FAMSSGFAQG VHHPFAVGVN EGAASTQGVF 
GFLLGEESRF YQRLTAALRA SRTDGGAAAT LIALSFAYGI FHAAGPGHGK AVISAYLLAN
EKMVRRGLVL SFCAALLQAG VAIALVTIAA MMVHATARQM TDTAHILEIA SYAGMAILGA
SLTFNKSKKL VAMVLAARDQ AARKMPAGLV FTPAGASSNF TAAPRASAFK AESVDPASPI
GASTGAQAFA CDDGCNHLLT LAPDASDKGI KSALLAVLAA GTRPCSGAIL VLIFALSQGI
FLTGVSATLA MALGTAITTG ALALLTVFAK TSALKLVAAK TPLSGGPYGP VLLSLFEMGA
ALLVLLFGLV MLGGNYFGKT TIF