Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3808 |
Symbol | |
ID | 6198011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010580 |
Strand | - |
Start bp | 119454 |
End bp | 120419 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641703941 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001831093 |
Protein GI | 182676946 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.323672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC GCGCCGTAAA GTGCCCCGAG CTTGAATATA TCATTTGTGA TTCCGATCAG TCATTCCGCT GGCACGCCCA TAGCTTTCCG CACGCGCTAG CGCGCTGGAA CTACCATCCG GAATTCGAGA TCCATCTCAT CACGCGCTCG TGCGGCACAG TTTTTATTGG GGACTACATC GGCGATTTCG CTCCTGGCCA TCTTTGCCTC GTGGGCGCCA ACCTGCCGCA TGTATGGGTA AGCAATATCG CGCCTGGCGA GTTCATCGAA AGGCGAGACA TCGTCCTGCA ATTCGACGAG AGCCTGCTGG TTCACGCAGC CGCCATGTTC CCGGAATTTA TCGAGATTCG CTCATTTCTG AACCTCGGTC TGCGCGGCCT CGAATTCCAC GGGGCGACGG CGAAGCGAGG TGCTGCAATT CTGCAGAAGA TCGGTGAAGC CCACGGTTTC CACCGCCTGA CACTCTTCTT CGAGCTCATC GATATGCTTG CCCGTTCGAA TGAAAAGACC GTTTTGGCCG GCGTGGATTA CGCGCCAAGC CTCGATCCGC GTACCGCCAA AATTATGGAA GACATTACTT CCTATGTTCT CAGCAATCTC TCTCGTGAGG TGCGCATGGT GGCCGCTGCC AAGATCGCCG GTATGACGGC CTCTGGCTTT TCACGGTTTT TCAAGAAGAA CACGGGTCGG ACCTTCGTTG AATATGTACA CAAGCTGCGC ATTGGCCGTG CGTGCAGAAT TTTGATTGAG ACCAATGTCC CAATCACGTC CATCTGTTTT GACGTTGGCT ACAACAATGT GTCCAATTTT AATCGTCATT TCCGCAAGGA GCGTGGTGTG ACGCCCTCCG CTTACAAGCG AATGGCGGGG CAGCAACTGC TGAGCGACCC CCGGGGTCTG TCCAGACAGG GATCCTTCGG AGGCCGCGCC CGATATCAGG AGAGCGAAGA TGTTTCTCGG CATTGA
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Protein sequence | MSDRAVKCPE LEYIICDSDQ SFRWHAHSFP HALARWNYHP EFEIHLITRS CGTVFIGDYI GDFAPGHLCL VGANLPHVWV SNIAPGEFIE RRDIVLQFDE SLLVHAAAMF PEFIEIRSFL NLGLRGLEFH GATAKRGAAI LQKIGEAHGF HRLTLFFELI DMLARSNEKT VLAGVDYAPS LDPRTAKIME DITSYVLSNL SREVRMVAAA KIAGMTASGF SRFFKKNTGR TFVEYVHKLR IGRACRILIE TNVPITSICF DVGYNNVSNF NRHFRKERGV TPSAYKRMAG QQLLSDPRGL SRQGSFGGRA RYQESEDVSR H
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