| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3797 |
|---|
| Symbol | |
|---|
| ID | 6198024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010580 |
|---|
| Strand | + |
|---|
| Start bp | 106999 |
|---|
| End bp | 108978 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641703932 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001831084 |
|---|
| Protein GI | 182676937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.622251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCA AGCTCTCGCT CGCGGCATTG AACGAGATCG CGGCACCGAC GGCGGTTCCC
ACCTATGCGC GCGAAAGCCT CTCCGCCGGC ATTGTGCATT TCGGCGTCGG CAATTTTCAC
CGTGCGCATC AGGCGGTCTA TCTTGACGAA TTGTTCAATG CCGGTCAAGA TCTTGACTGG
GCCATCATCG GCGCGGGCGT CATGCCTTCC GATGCGCTGA TCCGTGAAAA GCTGCTCGCG
CAGGATTGCC TGACGACGAT TGTCGAGCAG GACAATAACC GGACCGCCGC CCGCGTCACG
GGGGCGATGA TCGATATTTT GCCGACCGGC GATGCGGCGG CGATCATCGA GAGGCTGGCC
GAGCCGGCGA TCCGCATCGT CTCCATGACC ATTACCGAAG GCGGCTATTA CCTCGACGCG
AATGGCGCTT TCAACCCGAA GCATCCGGCG ATCGTCGAGG ATGGCCGTCA TCCCGAGGCG
CCGCGAACGG TGTTCGGGCT GATCGTCGCC GGCCTCAAGG CCCGCAGGGA GAAAGGCATC
GAGCCCTTCA CGGTTCTGTC TTGCGACAAC ATTCCGCATA ACGGCAAAGT CACCTATAAC
GCGGTCACGG GACTCGCGCG GCTCGCCGAT CCTGATTTCG CCAACTGGAT CGCCGCGAAT
GTCTCTTTTC CCAATTCCAT GGTCGACCGC ATCACGCCGG CGACAGGCCA GCGTGAGATT
GATATTGCCC GTGAAGATTT TGGCATTGAG GACAATTGGC CGGTCTTCTG CGAAGAATTT
CGGCAATGGG TGATCGAGGA TAAATTTCCT GCGGGGCGTC CGGCTTTGGA GAAAGTGGGC
GTCCAATTCG TCCTCGATGT TTCGCCCTAC GAACTCATGA AGATCCGTAT TCTCAACGGC
GGCCATGCGG CTATCGCTTA TCCCGCGGCC CTGCTTGACA TTCATTTCGT TCACGAAGCG
ATGGAAGAGC CGCTCATCCG CTCCTTTCTC GCCAAGCTCG AACGCGAGGA AATCATTCCG
GTCGTTCCAC CCGTGCCGGA TACCGATATC GACGCCTATT TCCAGTTGAT CGAGCGGCGT
TTCTCCAATT CGAAGATCGG TGACACGATC CCCCGTCTGG CGCAGGATGG TTCCAATCGG
CAGCCGAAAT TCATTTTGCC GACGACGAAA GACCGGCTGG CGCGTGGCGA CGACGTCATC
GGCCTTTCGC TGGTCTCCGC ACTCTGGTGT CGTTATTTCG CGGGAACATC GGATAGCGGC
AAAGACATTG TCTTCAACGA TGCGAGCGCC GAGCGGCTGC ATGCGGCTGC GCTCGAAGCG
AAAACAGACC CATCGGCCTT TCTCGCCCTC GAAGATATTT TCGGCACCAT CGGCCATTCG
GAACTGTTTG CCCGACGTTT CTCTCACGCC CTCAAGACAT TGTGGGAGAA GGGAACGCGC
GAGACGCTGA CGCTTTATCT AGGGTTAAGA CCTAATCAAC CCTATTTTGA TTCAATGGCT
TGGTCTAGGG TGGAGGCCAA GTCGATGGAT ACGAATTTAT TCTGGTTCAG TGACAAACAA
TGGGCGAAGA TCGTCCCGCA TTTGCCGACG AACCAGCCAG GGCCTCAGCG TGGGGATGAT
CGCCGTATCT TGAGCGGGAT CATGCATGTG TTGACAGCGG GCTGCCGCTG GAAAGATTGT
CCGAAGGAGT ATGGTCCCTT CAAGACGGTT TACAATCGCT TTGTCCGCTG GAGCGAACGC
GGCATTTGGC AGAAGATTTT CGCGCATGCG GCCGCTCCCG AGGCAGCCCC AGAACAGGCC
GCGTTGGACA GCACGCATGT GAAACTCCAC CGCTGTGCGG CCGGTGGACA AGGGGGGCTG
AAGCGCAGGC GATCGGCCTC ACGAAGGGCG GCCGTAACAG CAAAATCCAC GCGATCGTCG
ACCAGTTCTG CCGTCCCTGG GCGTTCATCC TCACGCCAGG TAATACCGCC GACTGTGTAA
|
|---|
| Protein sequence | MTGKLSLAAL NEIAAPTAVP TYARESLSAG IVHFGVGNFH RAHQAVYLDE LFNAGQDLDW
AIIGAGVMPS DALIREKLLA QDCLTTIVEQ DNNRTAARVT GAMIDILPTG DAAAIIERLA
EPAIRIVSMT ITEGGYYLDA NGAFNPKHPA IVEDGRHPEA PRTVFGLIVA GLKARREKGI
EPFTVLSCDN IPHNGKVTYN AVTGLARLAD PDFANWIAAN VSFPNSMVDR ITPATGQREI
DIAREDFGIE DNWPVFCEEF RQWVIEDKFP AGRPALEKVG VQFVLDVSPY ELMKIRILNG
GHAAIAYPAA LLDIHFVHEA MEEPLIRSFL AKLEREEIIP VVPPVPDTDI DAYFQLIERR
FSNSKIGDTI PRLAQDGSNR QPKFILPTTK DRLARGDDVI GLSLVSALWC RYFAGTSDSG
KDIVFNDASA ERLHAAALEA KTDPSAFLAL EDIFGTIGHS ELFARRFSHA LKTLWEKGTR
ETLTLYLGLR PNQPYFDSMA WSRVEAKSMD TNLFWFSDKQ WAKIVPHLPT NQPGPQRGDD
RRILSGIMHV LTAGCRWKDC PKEYGPFKTV YNRFVRWSER GIWQKIFAHA AAPEAAPEQA
ALDSTHVKLH RCAAGGQGGL KRRRSASRRA AVTAKSTRSS TSSAVPGRSS SRQVIPPTV
|
|---|
| |