| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3794 |
|---|
| Symbol | |
|---|
| ID | 6198027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010580 |
|---|
| Strand | + |
|---|
| Start bp | 104157 |
|---|
| End bp | 105062 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641703929 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001831081 |
|---|
| Protein GI | 182676934 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.621653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.929983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC GTTCAATCTA CCCAAGGTTC GCCATGGCGA CGTTACACAC CCGTTCGGCC
GCGCGTCTGA TGATGGCGCC CTCCGTTCTC CTCCTGCTGG CCTGGATGAT CATCCCGCTG
GCCATGACCA TCTACTTTTC CTTCCTGCGC TACAATCTGC TGATGCCGGG CACGGAGGAA
TTCGCGGGTC TCGCCAATTA TCAATATTTC TTGACGGATC CGGCTTTTTT CACGGCTCTC
GCGAATACAT TGTTGATCGT CGGCGGAGTG CTTCTGATCA CGGTGATTGG CGGGATCGCC
CTCGCATTGC TGCTCGATCA ACCGATGTAT GGGCAGGGCA TCGTGCGCAT TCTGGTGATC
GCGCCATTCT TCGTGATGCC GACGGTCTCC GCGCTCGTCT GGAAGAACAT GTTCATGAAT
CCGGTGAACG GCCTGTTCGC CTGGATCGCC GGTAGCTTTG GGCTGCAACC AATCGACTGG
CTGGCGAGCG TGCCCTTGTT GTCGATCATC ATCATCATCG CCTGGCAATG GCTGCCCTTT
TCCACCTTGA TCCTGCTGAC AGCGCTTCAG TCCCTCAATG AAGAGCAGAA GGAGGCGGCG
GAAATGGATG GCGCCGGCGC GATCTCGACA TTCATTTACA TCGTCCTGCC GCATATGGCG
CGTGCCATTA CCGTCGTCGT CCTCATTCAG ACGATCTTCC TTCTCTCGGT CTTCGCCGAG
ATCCTCGTCA CCACCAATGG CGGGCCTGGG GTGCAAAGCA CCAATCTCAC CTTTCTGGTC
TATACGCAGG CTCTTCTTCA ATTCGATATC GGCGGCGCAT CGGCGGGCGG CATCGTCGCT
GTCGTGCTCG CCAATATCGT CGCTGTCTTT CTGATCCGCC TCATCGGCAA AAACCTGGAG
GCTTGA
|
|---|
| Protein sequence | MPIRSIYPRF AMATLHTRSA ARLMMAPSVL LLLAWMIIPL AMTIYFSFLR YNLLMPGTEE
FAGLANYQYF LTDPAFFTAL ANTLLIVGGV LLITVIGGIA LALLLDQPMY GQGIVRILVI
APFFVMPTVS ALVWKNMFMN PVNGLFAWIA GSFGLQPIDW LASVPLLSII IIIAWQWLPF
STLILLTALQ SLNEEQKEAA EMDGAGAIST FIYIVLPHMA RAITVVVLIQ TIFLLSVFAE
ILVTTNGGPG VQSTNLTFLV YTQALLQFDI GGASAGGIVA VVLANIVAVF LIRLIGKNLE
A
|
|---|
| |