| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3697 |
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| Symbol | |
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| ID | 6197939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010580 |
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| Strand | + |
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| Start bp | 27119 |
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| End bp | 28564 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641703841 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001830993 |
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| Protein GI | 182676846 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.108936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGGG TTCTTGCCTT GCTGGGACGC CGAGGGGAAC CCCGCGCCTT CCGGCCCGAT
CAGGAGTTTC TGCCAGCGGC CCTGGCGATC CTGGAAACAC CCCCCTCGCC GATCGGTATC
GCCCTGTTGT GCACGATCTG CCTGCTCGCC GTCACAGCTC TTGCCTGGGC CTCGTTCAGC
CGCATCGATG TCATCGCCGT GGCGCAGGGC AAGATTCAGC CCGCCGGCCG GGTCAAACCG
ATCCAGCCGG TCGAAACCGG GAAAGTGATC GCGATCCAGG CCGCGAACGG CCAGCACGTC
AAGCAGGGGG AGATCCTGGT GGCCCTCGAT CCCGAGGATG CTCAGGCGGA AACCGTGGCG
CTCACCATGA GCCTTGCCTC CTTCAAGGCT GAAATCCTGC GCCGCAAGGC GGCCCTCGAG
GCAACGAAAG AGCACCTGCT CAGACCGCTG CCGCTCGTCC GGTGGGAGGA GGAGATCCCG
CGTCCCATCC AGGAACGCGA GGAGCGGGTG CTGCGGGGCG ACCTCGCCCT GTTCGCCGCA
CAGATCGAGG GCCTCGTTGC CCAGCGCCGG CAAAAGGAGG CCGAACAGGA GCGGCTCACC
AAGACCATCG CCGCCCAGGA GGCTCTCCTG GCGACGCTGG ACCAGCGCGT TGCCATGCGG
GAGGCCCTGG TCCAGCACAG CGCCGGCACG CGGGCGAACC TTCTCGATGC GATCGAATCC
CGCCAGTACC AGGACGTCAT CCTCAAGACG CAGCAAGGGC AGAAGGCCGA GAACGTGGCA
AGCCTCGCGG TTCTGATCCA GGACATCGCC AAGAGTTACG AGACGTTCAC CGCCGAAAAC
AGCCAGAAGC TCGCGGATGC GGAACGCCAG GCCGATGAGA ACGCGCAAAG GCTCGTCAAG
GCCCGTGTCA AGCTCGGCCA TATGCTGCTC ACGAGCCCGA TCGACGGCAC GGTGCAGGCG
CTCAGCGTGA CGACGCCAGG CCAGGTGATC GCCAGCGGCG AGGAGATCAT GCGGATCGTG
CCGGACGCCC CGGTCCTTGA AATCGAATGC TATCTTCAGA ACAAGGACAG CGGCTTCGTC
AGGCCGGGCC AGGAAGCCGT CGTGAAGGTG GAATCCTTCC CGTTCACGCG GTTTGGCACC
CTGGGGGCGG ATGTCGTGCG GGTCGCGCAG GATGCGATCC CCGAACCCGA TGCGCAGCTG
ATTGAAGGCA ACCCCGCCAA ATCGAACCGA TCGACCGTGT TCGCGGGGGC GCAGCGGGTC
CAGAATCTGG TGTTTCCCGT GACGCTCAGA CTGGCCGCTT CGACGATGAT CATCGAGGGG
ACCCCGGTTC CCCTCTCCCC GGGCATGGCC GTCAGCGTCG AGATCAAGAC CGGCAGCCGC
CGCGTCATCG ACTATCTGTT CTCCCCGCTC GTCGAAGTGG TTACAAGCGC TATGCGGGAA
CGATAA
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| Protein sequence | MKRVLALLGR RGEPRAFRPD QEFLPAALAI LETPPSPIGI ALLCTICLLA VTALAWASFS
RIDVIAVAQG KIQPAGRVKP IQPVETGKVI AIQAANGQHV KQGEILVALD PEDAQAETVA
LTMSLASFKA EILRRKAALE ATKEHLLRPL PLVRWEEEIP RPIQEREERV LRGDLALFAA
QIEGLVAQRR QKEAEQERLT KTIAAQEALL ATLDQRVAMR EALVQHSAGT RANLLDAIES
RQYQDVILKT QQGQKAENVA SLAVLIQDIA KSYETFTAEN SQKLADAERQ ADENAQRLVK
ARVKLGHMLL TSPIDGTVQA LSVTTPGQVI ASGEEIMRIV PDAPVLEIEC YLQNKDSGFV
RPGQEAVVKV ESFPFTRFGT LGADVVRVAQ DAIPEPDAQL IEGNPAKSNR STVFAGAQRV
QNLVFPVTLR LAASTMIIEG TPVPLSPGMA VSVEIKTGSR RVIDYLFSPL VEVVTSAMRE
R
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