| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3692 |
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| Symbol | |
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| ID | 6197927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010580 |
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| Strand | - |
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| Start bp | 11638 |
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| End bp | 14844 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641703836 |
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| Product | TrwC relaxase |
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| Protein accession | YP_001830988 |
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| Protein GI | 182676841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.372056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATT TCCGCAAGAT CTCGGCGGAT TCCCAAGGCG TCGTGCTGCG AACCTATTTC
ACCGAAGGCA AGACCGCGCC CATCCACGAC CCGACCAAAC ATCCAGAAAA ACAGCTCGAA
CCGGGCAGCC GATTGACGTC CTATTATACC GGCCGCGATA GCCGGGCCAC CTGGAGGCCA
GACATCACCC CGGCCTTCGC CAAGGCCGCG GGCATCGATC CGAGCCAAAT GCCGACCAGC
GAAGCCCTCG ACCGGCTCTT CGAGGGCAAG CGGGGGGATA ATGGGGAGCG CTGGTCCCAG
CACGAGCGAA CGCTATCCGG TTTCGATTTC ACCTTCTCGC CGCATAAATC GGTGACGATC
GCCGCCGAAT TCGCCGTGAC CCCCGCTGAA AGCGCGGCGA TCTGGAACGC TATTGACCGC
GCCAATGATG CCGCCATGCG CTATGCGGCC GGCCGCCTCG GTTTCGCGCG GCGCGGCAAA
GGCGGCGAGG AAGGCGTCGA TCCCGGTGAT GTCGGCTGGG TGAGCTTCCG GCATCACGTC
GCCCGGCCGA CCGTCGAGCT GCAGGACGGC AAAAGCGGGG CGACCTATCT GGTCGAGGCC
AAGACAGCGG GCGATCCCCA GGCCCATATC CATAATTTCC TGATGAACAT GGTCGTCACG
GCCGATGGCC GTGTCGGATC GCTCAACACC AAGGAGCTGA CGTCCGATCT GACCCATGAG
CTCGGCGGCT ATTTCCAGGC CCGCCTCGCC GACGAGTTGC GCCGCCTCGG CGCCGAGATC
GGCTATGACA AGAAGGACGA AGCCGTCGTT CTCGAGGCCA TTCCCCAAAA GGCGGTGGAC
ACCTTCAGCA AGCGCCGCCA GCAGGTCCTG CGCTCGGCCA AGGCTTTCGC CAAGAGCCAG
GGCCTTGATT GGGACGAACT CTCGATCGAG CGCAAGCAAA CGATCCTCAA TGAATCGAGC
GTCGTCTCGC GCTATGCCAA GCAAGACGGC AAGGGCGAAA AGGAAGCCTG GAAGGCCCAG
GCCGAAGCCA TCGGCTGGCG GCATGAAACC GTCCTGAACG GGGTCAGGCA CGAGGCCCTG
ACCGACGCGG AGCGCTACGA CAAAGCCTAT GACTTCGCTG CCAAACGCCT GGCCGAGGAT
TTCAAGACGG CCGCCGTCCT CAACCATGAT CGGTTGCGCG TCCATGCCGT GCGTGGCCTC
ATCGGTGCCG GCATAGCCCA TGGTCGCGAC GACATCGACA AAGTGGTCAC TCTCCTCGAA
CAACGCGGCC TCACCCTCCA GGGCGAGCAT GTGGCGCTGA TTACCAGCCG GATGGAGGAC
AAGGTGCGGA TCACCAATAC GGCGCAGATC CGCATCGAGA CCGAGCTCGC CAATAAGGCC
CGGGCCGTAG CGCGGGACAA GGACGGCGCG CTCTCTGCTC AAACCGTCAA GGCAGCGATC
AACGCCTCCG GCCTGGATTT CACCACTGAA CCCGAACATG GAGCGGCGCA GCGCGCGGCG
ATTCATGCAC TCGGCGAGGG CGGGCGCTTG ACCCTCCTGA CGGGCGTGGC CGGGTCCGGC
AAGACGACAC TCCTGCAACC CCTCGTCGCC GCCTGGAAGG CTGACACCCG CTATGATGCG
GGTGGCCGCG AAGTGATCGG CGTTGCCACC GCCTGGCGGC AAGCCGATGC CTTGAAGGAT
GCTGGTATCG ACAAGACCGT CGCCCTTCAG CCCTTCCTGC AATCGCTTGG CGTCGAGGGC
CAGCCCGACA CAACAACCCT GGCCAATGCC GGCATCGAGA AGACAGCCGG CGTCGAGGCC
TTGCTGCAAG CCATCGACAA GGGAACCGTC AAGCCGACCC ACAACACTGT CATCGTGATC
GACGAAGTCA GCCAGATCGG CCCGCGCGCC ATGCTGAAGC TCCTCGAGGT CCAGGCCGAG
ACCGGCATGA CCATCAAGGC CCTGGGCGAC CGGGAACAGG CACAGTCGAT CGAAGCCGGC
GACACGATCG AGATCCTGAA GCGCGTCCTC CCGAAGGAGG CCCTGCCCGC GCTCCTGACG
ACCGTGCGCC AGCGCACGCG GCGCGACCGC GACATCGCCA ATCTCTTCCG GGAAGGCAAG
GCCGGCGAGG CCCTGGGGAT GAAGATCGAG GATGGCACCG CCCGCCTCCT CGGCGGCGAT
CAGGATCAGG TCATCGGCCA GATCGCAGAC CTCTACATGC AGCGTCGCGA CATCCTGCGC
GCGGAGGATC CGAAGAAGAG CATCACCGTC TCCGCCTTGA CCAATCAGGA TGCGGCCGAC
ATCAGCCAGG CCATCCGCGA ACGGCTCAAG GCGCGTGGCG AGATCGGCGC CGATGAAAAG
CTTTATAAGG CGATCGACCA GCGCGGCGAG ACCTATGACC TCCGGATCGC CACGGGCGAC
AAGCTGCGCC TTTATCGGCG CACTTGGGCG ACGATCGATG GCAAGGGCGG CTCGATCGGC
GACAATGGCG ACATCGTCGA GGTTGTCGGC AGAAGTGCCG ATGGCTTCAC TTTCAAGGAC
AAGAAAGGCC GGATCGGCTC CGTTGAAATG AGGCGTCTGA TCGATCCAAA GACGCAGCGC
CTGATGCTCG GCTATGGCCA TGCCCTGACC ATCGACGCCG CCCAAGGCCT GACCTCGGAA
GAGCATATCA ACGCCTTGCC GCGCGGCAGT GCCGGCATCA GCAGCTTCAA AGGCTATGTC
GCAGAAAGCC GGAGCCGCGG CGCCACATGG ACCCTGGTTT CGGGAGCGGC CGTCCATGAG
GCTGAGAAGC GCAGCCGCGC CCTGGGTGAT GCCTCTCCTG TTACCACCGA GGACATCTGG
AAGCGCATCG CCGCTGATAT GGCCACGAAG AATTACAAGC CGCTGGCAAC CGATCTGATC
GGCACATTGC GCCGGCACCG AGAACAGGCG GTCGAGACCT TGTTGACCCT TGGGCTCAAG
GCTGAGGGTA AGGAGGGCAA ATCGAAGGAG CTTGGCCGGG ATCTGCGCCA GCTCATTCGG
GCCAAGGTCG TGCAGGAACA GGTCGATCCG GAAGTCGCGG CCTTGAATGC CGCGATCAAG
GAAAACGGAA AGCGGCTCGA TGCTCTCTCA AAGCGCGCCG CTTCGTTTCT GGAGGAGATG
CAAGCCGAGA CCCAGGAACA GCAGCGCAAG CTGGCCGAAG CACGGCAACG AAACGAAGCT
TCTCCCTCGC CTGCGGCAGG GAAATGA
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| Protein sequence | MMNFRKISAD SQGVVLRTYF TEGKTAPIHD PTKHPEKQLE PGSRLTSYYT GRDSRATWRP
DITPAFAKAA GIDPSQMPTS EALDRLFEGK RGDNGERWSQ HERTLSGFDF TFSPHKSVTI
AAEFAVTPAE SAAIWNAIDR ANDAAMRYAA GRLGFARRGK GGEEGVDPGD VGWVSFRHHV
ARPTVELQDG KSGATYLVEA KTAGDPQAHI HNFLMNMVVT ADGRVGSLNT KELTSDLTHE
LGGYFQARLA DELRRLGAEI GYDKKDEAVV LEAIPQKAVD TFSKRRQQVL RSAKAFAKSQ
GLDWDELSIE RKQTILNESS VVSRYAKQDG KGEKEAWKAQ AEAIGWRHET VLNGVRHEAL
TDAERYDKAY DFAAKRLAED FKTAAVLNHD RLRVHAVRGL IGAGIAHGRD DIDKVVTLLE
QRGLTLQGEH VALITSRMED KVRITNTAQI RIETELANKA RAVARDKDGA LSAQTVKAAI
NASGLDFTTE PEHGAAQRAA IHALGEGGRL TLLTGVAGSG KTTLLQPLVA AWKADTRYDA
GGREVIGVAT AWRQADALKD AGIDKTVALQ PFLQSLGVEG QPDTTTLANA GIEKTAGVEA
LLQAIDKGTV KPTHNTVIVI DEVSQIGPRA MLKLLEVQAE TGMTIKALGD REQAQSIEAG
DTIEILKRVL PKEALPALLT TVRQRTRRDR DIANLFREGK AGEALGMKIE DGTARLLGGD
QDQVIGQIAD LYMQRRDILR AEDPKKSITV SALTNQDAAD ISQAIRERLK ARGEIGADEK
LYKAIDQRGE TYDLRIATGD KLRLYRRTWA TIDGKGGSIG DNGDIVEVVG RSADGFTFKD
KKGRIGSVEM RRLIDPKTQR LMLGYGHALT IDAAQGLTSE EHINALPRGS AGISSFKGYV
AESRSRGATW TLVSGAAVHE AEKRSRALGD ASPVTTEDIW KRIAADMATK NYKPLATDLI
GTLRRHREQA VETLLTLGLK AEGKEGKSKE LGRDLRQLIR AKVVQEQVDP EVAALNAAIK
ENGKRLDALS KRAASFLEEM QAETQEQQRK LAEARQRNEA SPSPAAGK
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