| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3679 |
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| Symbol | |
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| ID | 6197942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010580 |
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| Strand | + |
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| Start bp | 1540 |
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| End bp | 2682 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641703823 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001830975 |
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| Protein GI | 182676828 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR02524] Dot/Icm secretion system ATPase DotB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.165494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CGCTTTCGAC GGTCTGGCAG GGACGGGGGG CTGACCCCTG GGTGCGCGAT
CCACGCAAAA GCGCGCCTGG TCTCGATCAT CTTCTGACCT GGGCCTATCG GCAGGGGGCT
TCGCGCATCG CCTTTTTGAG CGGTCATCCC GTCTGGGTGC GTATTCATGG CCTCAATCAA
CCGGTTGAGC CCGATCCCAT TCCTGAAAGC GATCTCGCTC TCATCACCAA CCATATCTAT
GGCGCCGATG GTACGGCGCG GTTGAAGAAA GGCCAGGACT TCGACCTCAC TTACGAAGTC
CTGCTCGATC GCGGCACCCG CCTGCGTTTT CGCATCAATG CGACGGCCAC GCGGACAAGC
CGCCGCGACG GCGTGAATAT CATCCTGCGG CCGATCCCTG ACAAGCCGCC GACGCTGGAA
CAGCAAAGGG TCGAGCAAGG CATCCTGGAG TCCTTTCGGC CGCATGAGGG CATGGTGATC
GTCTCGGGGG CGACGGGCTC GGGCAAATCG ACGCTGATCG CCGGCATGAC GATGGCCAAG
CTGAATGATC CCAATGGCCA TTACAACATC ATTGAAGGCG CGGCTCCCAT CGAATTCATG
TTCGATCGGA TGAGGAGCGA TAGTTCTACG ATCGTTCAGA GCGAGATCCC GATCGATCTG
CCGACTTTCG AAGCCTTTAT TCGCGGCTGT ATGCGGCGTG AGCCCACTGA CATCATTGTG
GGTGAGTGCC GTGACAGTGT CACGATGGCG GCGGCGATCC AGGCGGCGAT CTCGGGCCAT
ACTCTGACGA CGACGATCCA TGCCAATGAC GTCGCTTTGA CCATGCAGCG GATCGCAAGC
CTCTGTCCGC CCGATGAGCG GGACAATCTC ATCAGCGCGG TGGCGCAATC GCTGCGCCTT
GTCATCAATC AGAAACTGAT CCGTTCCAGC GATGGGAAGC GCATCGCTCT GCGCGAGTTT
CTGGTCTTCA ACCGCGCTCT GCGAACCACT TTCCTCGAAA CCGATCCGAA ATTGTGGCCC
GCCCTCACCC GGCAGGCCAT TGCGACGGAA GGACAATCTT ATGAGCAGGC GATCAACCGC
CTGCTCGAAG CCGGGCTGAT CTCGGAAGAG ACAGCTGCCC ATGAACGCAA GGAGATTGGA
TAA
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| Protein sequence | MNAPLSTVWQ GRGADPWVRD PRKSAPGLDH LLTWAYRQGA SRIAFLSGHP VWVRIHGLNQ
PVEPDPIPES DLALITNHIY GADGTARLKK GQDFDLTYEV LLDRGTRLRF RINATATRTS
RRDGVNIILR PIPDKPPTLE QQRVEQGILE SFRPHEGMVI VSGATGSGKS TLIAGMTMAK
LNDPNGHYNI IEGAAPIEFM FDRMRSDSST IVQSEIPIDL PTFEAFIRGC MRREPTDIIV
GECRDSVTMA AAIQAAISGH TLTTTIHAND VALTMQRIAS LCPPDERDNL ISAVAQSLRL
VINQKLIRSS DGKRIALREF LVFNRALRTT FLETDPKLWP ALTRQAIATE GQSYEQAINR
LLEAGLISEE TAAHERKEIG
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