| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2247 |
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| Symbol | |
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| ID | 6204179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010579 |
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| Strand | - |
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| Start bp | 21449 |
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| End bp | 21985 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703801 |
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| Product | conjugal transfer peptidase TraF |
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| Protein accession | YP_001830953 |
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| Protein GI | 182682755 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA TGATTAATCG TGCCGTCGCC GTATTGGTTG TGGTCGGCAT TTTGGGGATT
GCGGCCAGTG GCGTTATGTG TTTGGTCGGC GCTCGTGTGA ATACAAGCAA GAGTATTCCA
ATCGGACTGT ACTGGACGAG TAGTGCGCCC GTTACCAAGG GAAAATACGT CATTTTTTGC
CCGCCGCAGC GGACAGTGTT CGATAACGCA AGAAAGCGTG GCTATATCGG TCCAGGATTC
TGTCCTGGTG GCTACGGTTA CATGATGAAG AAAATTTTAG CCGCTAAAGG CGACACGGTT
TCTGTGACAC CACAGGGAGT TGCTGTCAAC GGAAGGTTGT TGCCATACAG CAAACCATTA
CTGGTTGATG GTGTCGGTCG GTCTATGCCT CGTATGAGTG ACGAGCGATA CACGCTTGGC
GAATCCGAAC TGTTGCTGAT GACTGACAGA AGTTCAACGT CATTTGATGC TCGTTACTAC
GGAATCATCA GCCGCGAACA AGTGAAGTCA GTGATCCGAC CCGTTCTCAC TTGGTAA
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| Protein sequence | MNRMINRAVA VLVVVGILGI AASGVMCLVG ARVNTSKSIP IGLYWTSSAP VTKGKYVIFC
PPQRTVFDNA RKRGYIGPGF CPGGYGYMMK KILAAKGDTV SVTPQGVAVN GRLLPYSKPL
LVDGVGRSMP RMSDERYTLG ESELLLMTDR SSTSFDARYY GIISREQVKS VIRPVLTW
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