| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3906 |
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| Symbol | |
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| ID | 6197896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010578 |
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| Strand | - |
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| Start bp | 48545 |
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| End bp | 50587 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703770 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001830922 |
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| Protein GI | 182676814 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA CAGCCATGAA CCAGACTTTC TCCGTGCCCG AGAAAGACCC CGATATCATG
GCGTCCTGGG AACGTTTCAT GAACGGGGAC GTTTCGGCAA CCAGCAGCCT GCGCGATCTT
ATCGATCAAT CTTGGCGCCG CTGCCACGAC GCTGACATTG ACCATCGGCG AAATCAAGCA
CCGCCACCGG TCAAGCAGGA TACCCTTCAT GCTTTGCGCG ATGAATGCGC CGAACTGATC
GAGGCCAGCG CACCGGTCAT GGCCTCGGCT CGAGACTTTC TCGGTGAAAC ATCGACCGTC
ATGGTCCTCA CGAATTCCAC AGGCCTGATC CTCAGCCAGG AAGGCGATGT ATCCTTGCGC
GGGGCCGCGG AGAATGTGCA TCTTCTGCCC GGTGCGAACT GGAGCGAGTT CACATGCGGT
ACCAACGCAA TAGGCACCGC GATTGAGATC GGCAGGCCAA TCCAGATTCA CTCCAACGAA
CATTATTGTT CTGGGATCAA GCGTTGGTCG TGCTCTGCAA GTATCATAAA AAATCCTTGC
GATGGATCAA CCCTCGGTGT GATCGACGTA TCCGGCCTCA GCCATTCTTA CAGCCGACAT
AGTCTCGCAC TCGTCGTGGC AACGGCTGGC CGCATCGAAA GCCGTATCGC GCAGATGGAA
ATGGATCTTC GCTATCGCCT CCTCGAGGGC TGCATGGATC GTCTCACAGC TCATTCCACA
GATGGCATAG TCGTCTTGGA CCGGCATGGC CGCGCGATCA AAGCCAATAC GCATGCAGCG
GTTATGTTGG CTGATCTCGG CGCACCACAA TCCCTGACGA GGAATAATCT GTTCTCTCTC
ACACTTGATT GGAGACGAGG ACACGATCTC CCAGAACATT TGCCGCCGTG GATACAAAAG
GAATGGTTGA CGCCAATGAA CGCTGGCGGC AAGCGTCTGG GAGTCATTCT GACAATTCCC
AACCGTCAAG GAGCATCGGC TAAGCTCGCT CGTGCCAGCA CACGCATTGC TCTTCCACCT
TCCGAGCCCG AACGGACGCG TATCTTCCCA AAACTCGTTG GACAAGCACC AGCTCTGCTT
CTGGCGGCCG CACGAGCGCG TCAGATCGCC AAAAGCAGTG TGCCGGTCCT TCTATTAGGC
GAGACCGGGG TCGGCAAGGA AGTCTTTGCG CGCGATCTGC ATGAAGCTTC AGCAGTCGGC
AAAGGGCCTT TCATCGCGCT CAATTGCGGT GGCCTTTCTC GCGATCTGCT GACCAGTGAG
TTGTTTGGCT ATGCAGAGGG CTCCTTTACC GGGGCGCGCC GAGGCGGCAT GATGGGAAAA
ATCGAAGCCG CAAATGGCGG CACTTTGTTT CTCGATGAGA TCGGAGAATT GCCAACCGAC
CTTCAGCCCC TTTTTCTGCG TGTATTAGAG GAGCGGGAAA TATGTCGCAT CGGCGAAGTA
CAGCCGCGGA AGGTGAATTT CCGGCTTGTT GCCGCGACCA ATCGCGACCT GCGTATGGAG
ACGCAAGCCA GCCGTTTCCG TATGGATCTC TATTACAGGC TTTCGGTCAT CAGCATCACC
ATTCCCCCAT TACGTGAAAG GTCTGAAGAC ATTCCGCTTC TCGCGGAACA TTTCACGGCC
TTGTTTACGA AACAATATGG CCTCCCTTCT CGCCATATTT CAGCCGATAT CATGAATGCG
TTGCAGCAAC ACGATTGGCC TGGCAATATC CGGGAGCTGC GGAATGTGAT TGAAGGTATA
CTCTTGACAT CGGCAAACGA GACTTTGACG AAAGCCGACC TGCCGCCCGA GTTTTCAGCG
TTGACAAATA AGCTACCGTC AACAGGAAAT TCGGACACCT CCTCATCGGC ACTGACACCG
ATCGAGAATG CGGAGCGTGA AACCATTGTC CGAATGCTTC GCACCCATCA CGGCAATATG
ACAGCTGTCG CCCGCGAGTT GGGAATTGCC AAAAGCACTC TTTACGTGAA GATGAAGATC
TTTCAGCTTG AAAATATCGC GCATGATCTC CGCGCTTCCA GCGGTAATAT AAAGCCTTAC
TGA
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| Protein sequence | MSRTAMNQTF SVPEKDPDIM ASWERFMNGD VSATSSLRDL IDQSWRRCHD ADIDHRRNQA
PPPVKQDTLH ALRDECAELI EASAPVMASA RDFLGETSTV MVLTNSTGLI LSQEGDVSLR
GAAENVHLLP GANWSEFTCG TNAIGTAIEI GRPIQIHSNE HYCSGIKRWS CSASIIKNPC
DGSTLGVIDV SGLSHSYSRH SLALVVATAG RIESRIAQME MDLRYRLLEG CMDRLTAHST
DGIVVLDRHG RAIKANTHAA VMLADLGAPQ SLTRNNLFSL TLDWRRGHDL PEHLPPWIQK
EWLTPMNAGG KRLGVILTIP NRQGASAKLA RASTRIALPP SEPERTRIFP KLVGQAPALL
LAAARARQIA KSSVPVLLLG ETGVGKEVFA RDLHEASAVG KGPFIALNCG GLSRDLLTSE
LFGYAEGSFT GARRGGMMGK IEAANGGTLF LDEIGELPTD LQPLFLRVLE EREICRIGEV
QPRKVNFRLV AATNRDLRME TQASRFRMDL YYRLSVISIT IPPLRERSED IPLLAEHFTA
LFTKQYGLPS RHISADIMNA LQQHDWPGNI RELRNVIEGI LLTSANETLT KADLPPEFSA
LTNKLPSTGN SDTSSSALTP IENAERETIV RMLRTHHGNM TAVARELGIA KSTLYVKMKI
FQLENIAHDL RASSGNIKPY
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