Gene Bind_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3885 
Symbol 
ID6197917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010578 
Strand
Start bp14689 
End bp15951 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content52% 
IMG OID641703751 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001830903 
Protein GI182676795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CGATTTATGG ACTTGGTTAT GTAGGGCTCA CGGCGGCGGG ATGCCTCACC 
AAGGAAGGGC ACTGGGTCCT TGGCGTCGAC GTGAGTGAAG ACAAAATCCG CCAGATCGCC
GAAGGCACAT CGCCCATAAA GGAACCCGGT CTCGCGGAGC TATTGCAGCA AGCTGTCACA
AATAATCTCA TCAAGTGCAC CAGCAATCCT GGTAATCTCA TCAATGAATG CGACATGGCG
ATCGTCTGCG TGGGCACGCC CAGCGGGCCC GACGGCGCTC ATAATATGAG CTATATCGCG
GAAGTCTCGC GCCAGATCGC CCACGCCGTC GATCCAGACC GGAAAGACCC TCTCACCGTC
GTCTTCAGAA GCACTATTCG CCCCGGAACG ATCGAAGAGC TCATTCTGCC AATCTTCAGG
TCTGTGCTCG ACTCCAAGAT CAATGCCGTC GAGCTCGTCT ATAATCCTGA ATTCTTGCGT
GAAGCTGTCG CCATCAACGA CTTCTTCAAT CCGCCCAAAA TCGTTATTGG CACATTTGAC
GGCAAGCCAT GCGCCAATAT GGACAAGATG AACCAGAACC TCAAAGCTCC GGTCTTCTAT
ACGCGTTACC GCGAAGCGGA ATTTACGAAA TTCGTTGATA ATACGTTCCA CGCCGTCAAG
GTTTCCTTTG CTAATGAGAT CGGGCGTGTC TGTCTCCAGC TCGGCATTAG CGCGCAGAAA
GTGCATGAAA TATTCGTCTC GGATACGAAA CTGAATATTT CACCCTATTA TCTGCGGCCC
GGTGGCCCCT TCGGCGGATC ATGCTTGCCG AAGGACGTGC GCGCGCTTCA ATATATTTCC
AGTGATGCGG GAGCGCATAC GCATCTTATT GACTCGCTTT TACGTTCGAA TGAGGCTCAC
AAACATTATC TCTTCGAGTA TTGTTTGAAA GGTGTCCCCA AGGATGCGCA TATCCTGATG
CTGGGCCTGG CGTTCAAATA CGATAGCGAT GATCTAAGAG AGAGCCCGAA AGTCGATCTC
GCTCGGAAGA TCCTGGTGAG TGGCTATAGA CTGTCGATCT ATGATCCTGC TCTCAAGCCG
CGTGATCTCA TCGGGCAAAA TCTCGGCTAT GTTTATTCTC AGCTTCCCAA TCTCGAGAAG
CTGCTCGTCT CGCAGTCGCA GATCGAACAA GACCGTTTCG CGGTTGTGAT CGACACTAAT
GGCAGCGCCA AGACGTTGAA GCTCACCTAT GACAAATTTA TCGATATCAA CGCTTTGGCG
TAG
 
Protein sequence
MKIAIYGLGY VGLTAAGCLT KEGHWVLGVD VSEDKIRQIA EGTSPIKEPG LAELLQQAVT 
NNLIKCTSNP GNLINECDMA IVCVGTPSGP DGAHNMSYIA EVSRQIAHAV DPDRKDPLTV
VFRSTIRPGT IEELILPIFR SVLDSKINAV ELVYNPEFLR EAVAINDFFN PPKIVIGTFD
GKPCANMDKM NQNLKAPVFY TRYREAEFTK FVDNTFHAVK VSFANEIGRV CLQLGISAQK
VHEIFVSDTK LNISPYYLRP GGPFGGSCLP KDVRALQYIS SDAGAHTHLI DSLLRSNEAH
KHYLFEYCLK GVPKDAHILM LGLAFKYDSD DLRESPKVDL ARKILVSGYR LSIYDPALKP
RDLIGQNLGY VYSQLPNLEK LLVSQSQIEQ DRFAVVIDTN GSAKTLKLTY DKFIDINALA