| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2223 |
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| Symbol | |
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| ID | 6201931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2530361 |
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| End bp | 2533063 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641703738 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001830890 |
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| Protein GI | 182682730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.161248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATC AAGCCAAACC GCTCAGTTCT TTATTACTGA ATCTGTGTAC ATTGCTGGCA
CTTGTAGCTT GTAAGCATCA ATCAACACCT GTTGAGTCTG CATCACCGGT CACTACCGTT
TCAGTTGACG TTAAACATCA TTCCCCTGAC CCACAACAGG CCCAGCCACT TCTAGCGTCT
TTGCATCAAC AGTTAGAAAG TTACCGTCGT ATTATGGTGC TTCTCACGGA TGATGGGGTA
CAGTCGCCTC AGGAGCGTGT TACTTCGAGC CAAGTTGGCC AAATTCTGTT TAATGAAGGA
TTGAATCAAC GCACCGCCTT TTCTAAAAGA ATTGATGCAC TGCTTGCTTC TGGTGCTCCT
AACCGTTTTG ATACTTTGAC AGTAATACTG GATTATATTG AGTCCTCCCC TGATCTCTAT
GACGCTGATC GTTTGGCCTT TCGTGAAGCG TTAAATGATC TTGACGCCCG TATTAACCAT
GATTCGGCGC TTCCGGCGAT AAAGTTGCGT CAACGTATTC ATGAAGATAT AGATGCATTA
AATCAGATTG AGCGCAACTA CAATCAGGAA ATTACTCGGC TATCTATTCC TTTTGATCGT
AATCGAGGAA TCCTTATTAA GCGTGAAAAG TGGGATGACT ACGTGGCGCA TTTGCGTCGT
TCTTACACAC GTAAAATGAT TTTGCATGAT TATGGAATTC TCGAAGCTTA TCCGATACCA
ATTGAAGAAA GCGAACATGA GATATTTGGT AATGAATTAC CTCCTAAAAC ATTGGTACTT
ACCTTCGATG ATGGCCCGCA TCGAATTTAT ACAAATGAAA TCAAAGAAAT CTTACAGCAC
TATGCTGTGC CAGCAGTGTT CTTCGAGGTT GGACGTAATA TTGGCAGATT CGATAGGGCC
GGAAAACCGC GACTAGGACC TTTATCTAAA ATCACCCGTG AGCTAATAGA GCAAGGATAC
GCAGTTGCTA ATCATAGTAT GACCCATGAC CTGTTATCTA AGCTTAGTGG CAATGCGCTC
CGCAAAGAGG TGATTAATGC AGATATAATA TTGCGTGCAG TTGATGAAAG GCGTGCACCA
TTATTCCGCT TCCCTTACGG AGCGCGTAAT GCTGAGGGGC TGCGATTACT TTCTGAAATC
GGCCTTCAAT CAGTGAGATG GAATATTGAT TCCCTTGACT GGGCCGATCC AGTTCCCAAT
TCTGTTGCCC GGCGTGTACT CCTCCAGGTG GCCCAAAGGC AGCGTGGCAT CATTTTATTT
CACGATATCC ATGACCGCGC AGTTAAAGCA TTACCGCAGA TTTTGGAGAA ACTTATCGCT
GAAGGCTACC AATTTGCTGG TTGGGATGGT CATGCTTTTA GCGTGAATAA TAGCCATCCT
AAAAGTGCCA AAATCGATGG TGAAGGGATA GAAACGACAG CTTCACGTTC TTGGGCAACA
GTGATTGGTG TGGATGACTA CACCAAATGG CCGAAATTGA AATACGCAGC TAACGACGCG
CAGGCAATTG CTAACACATT AATTCAATCC TTTGGCTTTC CATCTTCACA CGTCATTCTA
TTGAAGAACC GTGAGGCTAC TCGCGATAAA ATTCTTTCTG TTTTTAACGA CTTGGCGAAT
GGCCGTATAC AAAAAAATGA TCGCCTATTC GTCTTCTTTG CTGGTCATGG CGCCACACGC
CAACTCTCAT TAGGACGCGA AGTGGGTTAC ATCATTCCTG TTGACTCGGA TCCGGCGCAT
TTTGCAGATG ATGCGATTTC AATGACCAAG ATACAGAACA TCGCTAAGAG CTTTGAAGCT
AAGCATGTAC TGCTTGTGAT GGATGCTTGC TATAGCGGTT TGGGTTTAAT GCCTAAACAG
ACACAGACCA GTCCTCGCCT TGCTACGAAC ATTAACCGAA TGAGTCGTCA AATACTCACT
TCTGGTGCGC CTGATCAACC AGTGACCGAT AGAGGCCCAA ATGGGCATTC CGTCTTCACA
TGGGCGTTGT TGAAAGCCTT GTCTGGGCAT GCTGACTTTA ATGATGATGG ATTGATCACT
GGTACTGAAT TGGGAGCATA CGTTGCATCA GCCGTATCAA CGGTATCAGC ACAAACCCCA
GCATTCGGTC CCTTGCTTGG TTCACCGGGC GGGGAATTTG TGTTCGAGAT ACCCAGGCGT
AAAAAAATTC TGACAACACA AAACACAAAG AGACCTGTAA AGGCGATTAA CTTCAATCGT
CCTTTTGAGT CCGCAAATAC TACACGCCAA GCTAAAAAAC TACATCAAAA TACGACTGCC
GTTAAATTAA TCACAGTAAA AAATCTACAC CGTGATGAGG CAAGATTATT ATTACCTCCA
ACCGTTAAGT TGGGCAAAGG AAAGCTAGTC CAGCCTGCAA ATGATCTTGG GTTGCAATTA
TGCACTAAGG AACTTACCGA TCAATTCACT GACACACTGG AACTAAAACC CCACTTTTTA
CTGACGTCTA AAAATTTTGG TTTCTTTTAT CCTCCTCAGA GCGAATATGC ACAACATGTG
CCGTGGTTGC AGAACACCCT CAAAATAGAT TACCCACCTG TGACCACACA ACTCAATCGT
GGTGATATCT ATTTACAGTT AAATAATAAG GATAAAGCGC GAAAAACGTA TACCACTGAC
GTGGATCTTC AACCAGAAGA TTCTGCTACA AAGCAGCTGG GTATGAAACT GACTAAATTA
TGA
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| Protein sequence | MLNQAKPLSS LLLNLCTLLA LVACKHQSTP VESASPVTTV SVDVKHHSPD PQQAQPLLAS
LHQQLESYRR IMVLLTDDGV QSPQERVTSS QVGQILFNEG LNQRTAFSKR IDALLASGAP
NRFDTLTVIL DYIESSPDLY DADRLAFREA LNDLDARINH DSALPAIKLR QRIHEDIDAL
NQIERNYNQE ITRLSIPFDR NRGILIKREK WDDYVAHLRR SYTRKMILHD YGILEAYPIP
IEESEHEIFG NELPPKTLVL TFDDGPHRIY TNEIKEILQH YAVPAVFFEV GRNIGRFDRA
GKPRLGPLSK ITRELIEQGY AVANHSMTHD LLSKLSGNAL RKEVINADII LRAVDERRAP
LFRFPYGARN AEGLRLLSEI GLQSVRWNID SLDWADPVPN SVARRVLLQV AQRQRGIILF
HDIHDRAVKA LPQILEKLIA EGYQFAGWDG HAFSVNNSHP KSAKIDGEGI ETTASRSWAT
VIGVDDYTKW PKLKYAANDA QAIANTLIQS FGFPSSHVIL LKNREATRDK ILSVFNDLAN
GRIQKNDRLF VFFAGHGATR QLSLGREVGY IIPVDSDPAH FADDAISMTK IQNIAKSFEA
KHVLLVMDAC YSGLGLMPKQ TQTSPRLATN INRMSRQILT SGAPDQPVTD RGPNGHSVFT
WALLKALSGH ADFNDDGLIT GTELGAYVAS AVSTVSAQTP AFGPLLGSPG GEFVFEIPRR
KKILTTQNTK RPVKAINFNR PFESANTTRQ AKKLHQNTTA VKLITVKNLH RDEARLLLPP
TVKLGKGKLV QPANDLGLQL CTKELTDQFT DTLELKPHFL LTSKNFGFFY PPQSEYAQHV
PWLQNTLKID YPPVTTQLNR GDIYLQLNNK DKARKTYTTD VDLQPEDSAT KQLGMKLTKL
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