| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2182 |
|---|
| Symbol | |
|---|
| ID | 6201878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2477905 |
|---|
| End bp | 2479488 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641703695 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_001830851 |
|---|
| Protein GI | 182682691 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATA ACAAAGAGCA GGAACGTGCC GAGTTGCACA AAACCATTTG GCGCATCGCC
AACGATCTGC GCGGCAGTGT CGATGGCTGG GACTTTAAGA CCTATGTGCT GGGGATGCTG
TTTTATCGTT TTATCTCAGA GAATCTGACC AGTTACATCA ATGCGCAGGA GCCCCGAACC
GGTAACGGTA ATGTCGATTT TGACTACGCT CAATTGAGTG ATGCGGGTGC CGAGTCCGGC
CGCGCGGAAA CGGTGAAGGA AAAAGGTTTT TACATCTTGC CTTCTGAGCT GTTTGTCAGG
GTGCGGGCCG GAGCGAAGTT TGACGATAAC CTCAATGAGA CGTTGAGCAA GGTCTTTGCC
AACATTGAGC GCTCGGCGAT TGGCAGTGAT TCTGAGCAGG ACATCAAGGG GCTGTTTGAT
GATCTTGATG TCAACAGCAG TAAGCTCGGC CCGACTGTGC CCAAACGTAA CGAAAAGTTG
GTCAAGCTGC TTGAGGCTAT CGGCGATTTG CCGTTGACCA GTAGTGAAGG CGGGTTTACG
GAAAACACCA TCGATTTGTT CGGTGATGCT TACGAGTATC TGATGCAGAT GTACGCTTCC
ACGGCGGGCA AATCTGGGGG CGAGTTCTAC ACGCCGCAGG AAGTCTCTCA ATTGCTGACT
CAGATCACTG TGGTCGGCAA GACGGAGGTG AATAAGGTGT ATGACCCGGC CTGTGGTTCT
GGATCGCTGT TGCTCAACTT CGTCAAGGTG TTAGGACACG ATAAGGTGCG TCAGGGCTTC
TACGGACAAG AGATTAATCT CACCACTTAC AATCTGTGCC GCATCAATAT GTTTCTGCAC
AATGTGAATT ATGAGAAGTT CCACATTGCA CACGGTGACA CGCTCACCGA TCCGGCGCAT
TGGGATGATG AGCCGTTTGA AGCGATCGTT TCCAATCCGC CGTATTCGAT CAAATGGGAT
GGTGATTCCA ACGCGCTGCT CATCAATGAT CCGCGTTTTG CACCGGCGGG GATACTGGCG
CCTAAAAGTA AAGCCGATCT TGCTTTTACG CTGCATATTC TGAGTTGGCT GGCGGTCAAT
GGCACGGCGG CGATTGTTGA GTTTCCCGGT GTTCTTTATC GCGGCGGTGC GGAGCAGAAA
ATCCGCCAAT ATCTCATCGA CAATAATTAT GTTGATGCGG TCATCCAGTT GCCGGCTGAT
TTGTTCTTTG GTACGACGAT TGCTACTTGC ATCATCGTGT TAAAGAAGTC CAAGGGTGAT
AACGCGACGT TATTCATGGA TGCTTCTAGT TTGTTTGTAC GCAGTGGCAC CAAGAACAAG
CTGAGCACGG CGCATCAGAA AAAAATCCTT GATGGTTTCA CGGCACGTCA GGACATTGAG
CATTTTGCGC GTTTGGTTGA CAACAGTGAC ATTGCCGCTA ACGGCTACAA CATCGCTGTG
TCCAGTTACA TTGCGCAGGC CGACACGCGT GAGAGTATCG ATATCAAGGC GCTCAATCGT
GACATTGCCC GCATCGTTGC AAGACAAGCC GAATTGAGGA AGCAGATTGA TGCCATCGTA
GCTGATCTAG AAGGGGAGCC ATGA
|
|---|
| Protein sequence | MSNNKEQERA ELHKTIWRIA NDLRGSVDGW DFKTYVLGML FYRFISENLT SYINAQEPRT
GNGNVDFDYA QLSDAGAESG RAETVKEKGF YILPSELFVR VRAGAKFDDN LNETLSKVFA
NIERSAIGSD SEQDIKGLFD DLDVNSSKLG PTVPKRNEKL VKLLEAIGDL PLTSSEGGFT
ENTIDLFGDA YEYLMQMYAS TAGKSGGEFY TPQEVSQLLT QITVVGKTEV NKVYDPACGS
GSLLLNFVKV LGHDKVRQGF YGQEINLTTY NLCRINMFLH NVNYEKFHIA HGDTLTDPAH
WDDEPFEAIV SNPPYSIKWD GDSNALLIND PRFAPAGILA PKSKADLAFT LHILSWLAVN
GTAAIVEFPG VLYRGGAEQK IRQYLIDNNY VDAVIQLPAD LFFGTTIATC IIVLKKSKGD
NATLFMDASS LFVRSGTKNK LSTAHQKKIL DGFTARQDIE HFARLVDNSD IAANGYNIAV
SSYIAQADTR ESIDIKALNR DIARIVARQA ELRKQIDAIV ADLEGEP
|
|---|
| |