| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2167 |
|---|
| Symbol | |
|---|
| ID | 6204033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 2456899 |
|---|
| End bp | 2457753 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641703681 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_001830837 |
|---|
| Protein GI | 182682677 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACG TCACCCTACT TCCCAGCCCA TCACAGATCG CATTCATCGG CGGCGGCAAT
ATGGCGCGCA GCTTGATCGC AGGCATGATC CGCCAAGGCG CCCCCAGCAC GTCAATATGC
GTCATCGAAC CAATCGCCGC ACTGCGCGAT GCACTTATCG CTGACTTCAA AATCAAGGCC
GTCACCACAG CCACAGAAGC GGCCACCGAC ACCAGCACCT GGGTGCTGGC CGTGAAACCC
CAAGTGATGC CTGACGTGTG TGCCACCCTG CCACTTCCAG TGCAACCCAA CACACCACTG
GTTATCTCAA TCGCTGCAGG CATCACCACC TGCAAACTCA AACACTGGCT TGGCGACACC
TGTGCGATTG TGCGCGCCAT GCCGAATACC CCAGCCCTGC TAGGTGCCGG CGTAACCGGA
CTATTCGCCA CCTCACAAAC CACGGGCACA CAACGCACCA TCGCTGAAGA ACTCTTTAAC
AGCGTAGGCA AGACCCTATG GATCACCGAA GAAGCGTTAA TGGACGCCGT GACTGCCGTA
TCAGGGAGCG GTCCAGCCTA TGCGTTTTTG CTTGCCGAAG CGATGGAAAC AGCAGCCATC
ATGCAAGGCC TCTCCACCGC AAACGCACGC ACACTCGTCC AGCAAACCCT ATTGGGTGCC
GCACGCATGA TGACCGAGTC AGGGGAAACA CCTGCCGCAC TGCGCCACCG CGTCACCTCA
CCGCATGGGA CCACCGAAGC GGCAATCACA ACATTTCAAG AAAACGACTT CCAAACACTT
GTCGCAAAAG CGATAGACGC CGCCACCCGG CGCGCACGCG CCCTCGGAAA GATAAACGAT
ACCGATCCCA CCTGA
|
|---|
| Protein sequence | MPHVTLLPSP SQIAFIGGGN MARSLIAGMI RQGAPSTSIC VIEPIAALRD ALIADFKIKA
VTTATEAATD TSTWVLAVKP QVMPDVCATL PLPVQPNTPL VISIAAGITT CKLKHWLGDT
CAIVRAMPNT PALLGAGVTG LFATSQTTGT QRTIAEELFN SVGKTLWITE EALMDAVTAV
SGSGPAYAFL LAEAMETAAI MQGLSTANAR TLVQQTLLGA ARMMTESGET PAALRHRVTS
PHGTTEAAIT TFQENDFQTL VAKAIDAATR RARALGKIND TDPT
|
|---|
| |