| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2158 |
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| Symbol | |
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| ID | 6203220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2437478 |
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| End bp | 2439172 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703672 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001830828 |
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| Protein GI | 182682668 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.156319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGATA TCACAAGTTC CGAAAGCGGG AGCGCTACCT CGCATGGCGA AAGCGAAAAA
ACCGTGCGTA AAATCCGCAC AAGCAAGTCC AGTGTGGAAA GTAGCCAACA ATCCGTGACA
CACCAAACCG TACAGCCACA AACACCAGAG ACCGAAGCTC AACGTGCTGC GCATTTGGAA
TCAGCCCCCC CTCCCTCGCA AGTCATGTCC CAAACGTCTG CAACCACTCC CTCCGTACAG
GACAGCAGTG AATCAGCAGA AGGCTATGGG CAACAGAACC AGCGATTCAA TAACAACAGA
CGGGATCGCT TCCGGAACCG ACGCGAGCGT AATCGTGATC GTTTCCGCGA TGAAAACAAT
AGCAACGGTG AAGACGGCAA CCACGAACCA TACATGCCAC GTCCACACCC AAGTGTGCCA
GAGGGATTCC CAATATATTC GCTGAGCGAT CTGAAAAAGA TGCCAGCACA CAAACTGCTA
GAAATCGCTG AGCAACTCAA CATCCACGAA GGTGTAGCGC GTGCACGCAA GCAAGATGTG
ATCTTTGCAC TTCTAAAAGT ACTGACCCGT CACGGCGAAG GCGTGTTTGC TGACGGCGTT
CTGGAAATCC TTCCAGATGG TTTTGGCTTT CTGCGCGCAG CCGAAGCCAG CTACTTGGCC
GGTCCAGACG ATACCTATAT TTCCCCCAGT CAAATTCGCC GCTTCAATCT ACGCACTGGT
GATCACCTGT CGGGCCGGAT TCGTTTCCCT AAGGACGGTG AACGGTACTT TGCATTGTCA
ATCGTTGATA CGATTAATGG CGAACCTCTG GAAGCTTCCA AAAATAAGAT CCTTTTTGAG
AACCTGACCC CACTGTTTCC ACGCAAACGC TTCCGTTTGG AACGCGCTGA CGGCTCGACA
GAGGATATTA CCGGCCGCAT CCTTGATTTG ATGGCACCAC AAGGCAAGGG GCAACGTGCA
CTAATAGTAT CCCCCCCAAA AGCCGGTAAA ACGATGCTAA TGCAACAGGT AGCAACGGCG
ATCACTACCA ATCATCCAGA AGTACACCTG ATTGTATTAC TGATTGACGA ACGTCCTGAA
GAAGTGACAG AAATGCAGCG CACTGTTCGG GGCGAAGTTA TTTCCTCAAC GTTTGACGAG
CCAGCTGCAC GCCATGTACA AGTCGCCGAA ATGGTCATCG AACGCGCAAA GCGCTTAATC
GAACATAAAA AGGATGTAGT CATCCTACTT GACTCAATCA CCCGTTTGGC ACGTGCCTAT
AACAACGTTG TACCCAGCTC AGGCAAGGTA CTCACTGGTG GCGTGGATGC ACACGCACTA
CATCGCCCCA AACGCTTCTT CGGTGCAGCA CGCAATGTCG AAGAAGGTGG CTCGCTGACC
ATCATCGCAA CCGCACTCAT CGATACCGGC AGCAAAATGG ATGAGGTAAT CTATGAAGAG
TTCAAGGGTA CTGGCAACTG CGAGTTACAT CTAAATCGCC GTATTGCCGA GAAACGCGTA
TATCCGGCAA TTGATATCAA CCGTTCCGGT ACTCGCCGTG AAGATTTATT GATCGAATCC
GATCTATTGC AGAAAATTTG GATCCTTCGC AAATTACTGC ACCCAATGGA CGAGATTGCA
GCAATCGAGT TTGTGCTTGA TAAAATGAAG AACACCAAGT CGAACGACGA GTTCTTTGGT
TCAATGAAGC GCTAA
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| Protein sequence | MSDITSSESG SATSHGESEK TVRKIRTSKS SVESSQQSVT HQTVQPQTPE TEAQRAAHLE
SAPPPSQVMS QTSATTPSVQ DSSESAEGYG QQNQRFNNNR RDRFRNRRER NRDRFRDENN
SNGEDGNHEP YMPRPHPSVP EGFPIYSLSD LKKMPAHKLL EIAEQLNIHE GVARARKQDV
IFALLKVLTR HGEGVFADGV LEILPDGFGF LRAAEASYLA GPDDTYISPS QIRRFNLRTG
DHLSGRIRFP KDGERYFALS IVDTINGEPL EASKNKILFE NLTPLFPRKR FRLERADGST
EDITGRILDL MAPQGKGQRA LIVSPPKAGK TMLMQQVATA ITTNHPEVHL IVLLIDERPE
EVTEMQRTVR GEVISSTFDE PAARHVQVAE MVIERAKRLI EHKKDVVILL DSITRLARAY
NNVVPSSGKV LTGGVDAHAL HRPKRFFGAA RNVEEGGSLT IIATALIDTG SKMDEVIYEE
FKGTGNCELH LNRRIAEKRV YPAIDINRSG TRREDLLIES DLLQKIWILR KLLHPMDEIA
AIEFVLDKMK NTKSNDEFFG SMKR
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